RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CCDC186Q7Z3E2 898 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 NOP9Q86U38 636 aaKnown RBP17.59■□□□□ 0.41
CLN6-208ENST00000567060 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 ZNF276Q8N554 614 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 OR8K1Q8NGG5 319 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 DNAJC7Q99615 494 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 IL21Q9HBE4 155 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 NOTCH4Q99466 2003 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 F11P03951 625 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 GABRR2P28476 465 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 TUBP50607 506 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 TBX2Q13207 712 aaPredicted RBP17.58■□□□□ 0.4
CLN6-208ENST00000567060 SDHAF4Q5VUM1 108 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 PM20D1Q6GTS8 502 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 TMEM110Q86TL2 294 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 VPS36Q86VN1 386 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 MON1AQ86VX9 555 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 ZDHHC17Q8IUH5 632 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 STKLD1Q8NE28 680 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 UBA3Q8TBC4 463 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 RSAD2Q8WXG1 361 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 IRGQQ8WZA9 623 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 MRPS31Q92665 395 aaKnown RBP17.58■□□□□ 0.4
CLN6-208ENST00000567060 FBXO32Q969P5 355 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 RMDN1Q96DB5 314 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 CDK5RAP1Q96SZ6 601 aaKnown RBP17.58■□□□□ 0.4
CLN6-208ENST00000567060 TRIM62Q9BVG3 475 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 SLC4A5Q9BY07 1137 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 ACP6Q9NPH0 428 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 TLR8Q9NR97 1041 aaKnown RBP17.58■□□□□ 0.4
CLN6-208ENST00000567060 ZNHIT6Q9NWK9 470 aaKnown RBP17.58■□□□□ 0.4
CLN6-208ENST00000567060 HCFC1R1Q9NWW0 138 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 TRPM5Q9NZQ8 1165 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 FBXL21Q9UKT6 434 aa17.58■□□□□ 0.4
CLN6-208ENST00000567060 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
CLN6-208ENST00000567060 DENND4CQ5VZ89 1909 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 GOLGA6L6A8MZA4 724 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 MFAP3LO75121 409 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 CYP1A1P04798 512 aaPredicted RBP17.57■□□□□ 0.4
CLN6-208ENST00000567060 SERPING1P05155 500 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 MYL4P12829 197 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 PDCLQ13371 301 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 PMF1Q6P1K2 205 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 DENND1BQ6P3S1 775 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 GAREM2Q75VX8 874 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 TMC6Q7Z403 805 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 SIX6OS1Q8N1H7 587 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 IPO4Q8TEX9 1081 aaKnown RBP17.57■□□□□ 0.4
CLN6-208ENST00000567060 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 GRPEL1Q9HAV7 217 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 ZNF334Q9HCZ1 680 aaPredicted RBP17.57■□□□□ 0.4
CLN6-208ENST00000567060 IGSF9Q9P2J2 1179 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 WNT16Q9UBV4 365 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 CDH7Q9ULB5 785 aa17.57■□□□□ 0.4
CLN6-208ENST00000567060 DOCK6Q96HP0 2047 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 MED19A0JLT2 244 aaPredicted RBP17.56■□□□□ 0.4
CLN6-208ENST00000567060 AKR1B15C9JRZ8 316 aaPredicted RBP17.56■□□□□ 0.4
CLN6-208ENST00000567060 ADCY5O95622 1261 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 ZBED1O96006 694 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 MMEP08473 750 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 ZDHHC11BP0C7U3 371 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 SCNN1AP37088 669 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 TKTL1P51854 596 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 USP46P62068 366 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 CDK17Q00537 523 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 FMO1Q01740 532 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 ARID5AQ03989 594 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 TAF10Q12962 218 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 HS6ST3Q8IZP7 471 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 C1orf131Q8NDD1 294 aaKnown RBP17.56■□□□□ 0.4
CLN6-208ENST00000567060 SHKBP1Q8TBC3 707 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 NXPE3Q969Y0 559 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 SYT11Q9BT88 431 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 ATXN3LQ9H3M9 355 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 TASP1Q9H6P5 420 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 CLIC5Q9NZA1 410 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 EPS15L1Q9UBC2 864 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 R4GN57 208 aa17.56■□□□□ 0.4
CLN6-208ENST00000567060 NCOR2Q9Y618 2525 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 ZNF840PA6NDX5 716 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 LMNAP02545 664 aaKnown RBP17.55■□□□□ 0.4
CLN6-208ENST00000567060 CFHP08603 1231 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 GZMAP12544 262 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 TNFAIP3P21580 790 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 CDR1P51861 262 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 NOMO3P69849 1222 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 CENPCQ03188 943 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 SLC5A9Q2M3M2 681 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 KLHDC10Q6PID8 442 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 BEND5Q7L4P6 421 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 GPRIN1Q7Z2K8 1008 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 WDTC1Q8N5D0 677 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 SCAMP5Q8TAC9 235 aa17.55■□□□□ 0.4
CLN6-208ENST00000567060 FGF13Q92913 245 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms