RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 SLITRK1Q96PX8 696 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 FIZ1Q96SL8 496 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 PRORYQ9H606 182 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 PRDM16Q9HAZ2 1276 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 CDH9Q9ULB4 789 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 TBCAO75347 108 aaKnown RBP17.91■□□□□ 0.46
CDH3-205ENST00000566808 PSMC1P62191 440 aaKnown RBP17.91■□□□□ 0.46
CDH3-205ENST00000566808 SMAD1Q15797 465 aaKnown RBP17.91■□□□□ 0.46
CDH3-205ENST00000566808 GRAMD4Q6IC98 578 aa17.91■□□□□ 0.46
CDH3-205ENST00000566808 KIAA1324Q6UXG2 1013 aaKnown RBP17.91■□□□□ 0.46
CDH3-205ENST00000566808 DBX2Q6ZNG2 339 aa17.91■□□□□ 0.46
CDH3-205ENST00000566808 ZNF843Q8N446 348 aa17.91■□□□□ 0.46
CDH3-205ENST00000566808 RHBDD1Q8TEB9 315 aa17.91■□□□□ 0.46
CDH3-205ENST00000566808 CACTINQ8WUQ7 758 aaKnown RBP17.91■□□□□ 0.46
CDH3-205ENST00000566808 POMGNT1Q8WZA1 660 aa17.91■□□□□ 0.46
CDH3-205ENST00000566808 NXPE2Q96DL1 559 aa17.91■□□□□ 0.46
CDH3-205ENST00000566808 TP53BP1Q12888 1972 aaPredicted RBP17.9■□□□□ 0.46
CDH3-205ENST00000566808 FAM149AA5PLN7 773 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 BCAT2O15382 392 aaPredicted RBP17.9■□□□□ 0.46
CDH3-205ENST00000566808 ATP2C2O75185 946 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 NCAM1P13591 858 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 HLA-EP13747 358 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 PLCG1P19174 1290 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 CYP27A1Q02318 531 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 TAF10Q12962 218 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 SOWAHAQ2M3V2 549 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 ANO4Q32M45 955 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 BRSK2Q8IWQ3 736 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 CADM4Q8NFZ8 388 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 CXorf38Q8TB03 319 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 ZFRQ96KR1 1074 aaKnown RBP17.9■□□□□ 0.46
CDH3-205ENST00000566808 C8orf48Q96LL4 319 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 ACOX2Q99424 681 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 SLC6A17Q9H1V8 727 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 ST6GALNAC4Q9H4F1 302 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 CRTAC1Q9NQ79 661 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 SPHK2Q9NRA0 654 aa17.9■□□□□ 0.46
CDH3-205ENST00000566808 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.9■□□□□ 0.46
CDH3-205ENST00000566808 GOLGA8CPA6NN73 597 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 F8VP50 259 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 J3QKU1 62 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 CAPN9O14815 690 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 SLC26A4O43511 780 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 WNT7BP56706 349 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 POSTNQ15063 836 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 HLA-BQ31612 363 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 TDRD10Q5VZ19 366 aaKnown RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 DPH6Q7L8W6 267 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 METTL3Q86U44 580 aaKnown RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 CSGALNACT2Q8N6G5 542 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 SCFD1Q8WVM8 642 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 KBTBD7Q8WVZ9 684 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 HVCN1Q96D96 273 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 TOE1Q96GM8 510 aaKnown RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 PCED1BQ96HM7 432 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 FCRL3Q96P31 734 aaPredicted RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 LLPHQ9BRT6 129 aaKnown RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 MIR1-1HGQ9H1L0 117 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 ZHX3Q9H4I2 956 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 DNAJC17Q9NVM6 304 aaKnown RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 USP36Q9P275 1121 aaKnown RBP17.89■□□□□ 0.45
CDH3-205ENST00000566808 SH3BP1Q9Y3L3 701 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 RAD54BQ9Y620 910 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 CKAP5Q14008 2032 aa17.89■□□□□ 0.45
CDH3-205ENST00000566808 CAPN8A6NHC0 703 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 CYSRT1A8MQ03 144 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 GFRA2O00451 464 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 TRIM24O15164 1050 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 TNFSF14O43557 240 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 CACNG3O60359 315 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 KRT18P05783 430 aaKnown RBP17.88■□□□□ 0.45
CDH3-205ENST00000566808 KRT19P08727 400 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 ITPKBP27987 946 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 ADSSP30520 456 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 HMGN5P82970 282 aaKnown RBP17.88■□□□□ 0.45
CDH3-205ENST00000566808 RBP5P82980 135 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 BNC1Q01954 994 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 SUZ12Q15022 739 aaKnown RBP17.88■□□□□ 0.45
CDH3-205ENST00000566808 PTPRNQ16849 979 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 LRRC69Q6ZNQ3 347 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 LIMS2Q7Z4I7 341 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 TMEM25Q86YD3 366 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 BBS7Q8IWZ6 715 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 PDZD8Q8NEN9 1154 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 ENGASEQ8NFI3 743 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 ERLEC1Q96DZ1 483 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 FAM213AQ9BRX8 229 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 WSB2Q9NYS7 404 aaPredicted RBP17.88■□□□□ 0.45
CDH3-205ENST00000566808 SIX4Q9UIU6 781 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 BTBD3Q9Y2F9 522 aa17.88■□□□□ 0.45
CDH3-205ENST00000566808 COL5A1P20908 1838 aaPredicted RBP17.88■□□□□ 0.45
CDH3-205ENST00000566808 VWA3AA6NCI4 1184 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 COCHO43405 550 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 LMO2P25791 158 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 GRK6P43250 576 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 MYO1EQ12965 1108 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 STARD3Q14849 445 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
CDH3-205ENST00000566808 MYCBPAPQ8TBZ2 947 aa17.87■□□□□ 0.45
CDH3-205ENST00000566808 OVCA2Q8WZ82 227 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms