RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TXNDC11Q6PKC3 985 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 MAMSTRQ6ZN01 415 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 GBP6Q6ZN66 633 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 PIGZQ86VD9 579 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 GPT2Q8TD30 523 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 OTUB2Q96DC9 234 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 MED15Q96RN5 788 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 FAM86C1Q9NVL1 165 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 CFAP97Q9P2B7 532 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 E2F8A0AVK6 867 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 TRDMT1O14717 391 aaKnown RBP20.91■□□□□ 0.94
CMTM3-211ENST00000565922 RALAP11233 206 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 GJA4P35212 333 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 CCR3P51677 355 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 ZXDBP98169 803 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 MAN2A1Q16706 1144 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 ZNF528Q3MIS6 628 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 SMYD5Q6GMV2 418 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 RBM43Q6ZSC3 357 aaKnown RBP20.91■□□□□ 0.94
CMTM3-211ENST00000565922 RRAGAQ7L523 313 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 TTC30AQ86WT1 665 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 ZNF276Q8N554 614 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 LRRC4Q9HBW1 653 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 CLIC5Q9NZA1 410 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 NAGPAQ9UK23 515 aa20.91■□□□□ 0.94
CMTM3-211ENST00000565922 MYOFQ9NZM1 2061 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 OTOL1A6NHN0 477 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-211ENST00000565922 PROB1E7EW31 1015 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 O00370 1275 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 DRD1P21728 446 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 MTAPQ13126 283 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 CCINQ13939 588 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 EXOC3L4Q17RC7 722 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 TMEM196Q5HYL7 178 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 RAB41Q5JT25 222 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 TRIM65Q6PJ69 517 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 IRF2BP1Q8IU81 584 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 ARHGEF19Q8IW93 802 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 RBBP8NLQ8NC74 664 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-211ENST00000565922 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.9■□□□□ 0.94
CMTM3-211ENST00000565922 KIAA1549LQ6ZVL6 1849 aa20.9■□□□□ 0.94
CMTM3-211ENST00000565922 A0A1W2PQH9 124 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 SP9P0CG40 484 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 RARGP13631 454 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 HOXD11P31277 338 aaPredicted RBP20.89■□□□□ 0.93
CMTM3-211ENST00000565922 PLA2G4AP47712 749 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 MRE11P49959 708 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 MFAP3P55082 362 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 PDE4CQ08493 712 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 CNGA2Q16280 664 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 SASS6Q6UVJ0 657 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 LCLAT1Q6UWP7 414 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 CCDC26Q8TAB7 109 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 KAT5Q92993 513 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 CD101Q93033 1021 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 ZFRQ96KR1 1074 aaKnown RBP20.89■□□□□ 0.93
CMTM3-211ENST00000565922 P2RY13Q9BPV8 354 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 SEMA4AQ9H3S1 761 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 UBE2TQ9NPD8 197 aaPredicted RBP20.89■□□□□ 0.93
CMTM3-211ENST00000565922 PRMT8Q9NR22 394 aaPredicted RBP20.89■□□□□ 0.93
CMTM3-211ENST00000565922 APEX2Q9UBZ4 518 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 DNMT3LQ9UJW3 386 aa20.89■□□□□ 0.93
CMTM3-211ENST00000565922 LSM7Q9UK45 103 aaKnown RBP20.89■□□□□ 0.93
CMTM3-211ENST00000565922 ADH1CP00326 375 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 TKTL1P51854 596 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 ZNF132P52740 706 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 FBXO43Q4G163 708 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 SIX6OS1Q8N1H7 587 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 SPEM1Q8N4L4 309 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 KCTD13Q8WZ19 329 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 KREMEN1Q96MU8 473 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 CRACR2AQ9BSW2 395 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 FAM126AQ9BYI3 521 aaPredicted RBP20.88■□□□□ 0.93
CMTM3-211ENST00000565922 LINC00597Q9H2U6 94 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.88■□□□□ 0.93
CMTM3-211ENST00000565922 CNTN6Q9UQ52 1028 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 ATG2BQ96BY7 2078 aa20.88■□□□□ 0.93
CMTM3-211ENST00000565922 ZBED1O96006 694 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 KRT5P13647 590 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 CSTF1Q05048 431 aaKnown RBP20.87■□□□□ 0.93
CMTM3-211ENST00000565922 C10orf120Q5SQS8 335 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 MAML2Q8IZL2 1156 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-211ENST00000565922 ADGRG2Q8IZP9 1017 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 NKD2Q969F2 451 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-211ENST00000565922 TUBGCP2Q9BSJ2 902 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 NDST4Q9H3R1 872 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 NMUR1Q9HB89 426 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 RBM12Q9NTZ6 932 aaKnown RBP20.87■□□□□ 0.93
CMTM3-211ENST00000565922 ANO10Q9NW15 660 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 OSER1Q9NX31 292 aa20.87■□□□□ 0.93
CMTM3-211ENST00000565922 M0QYV0 167 aa20.86■□□□□ 0.93
CMTM3-211ENST00000565922 RNF225M0QZC1 329 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-211ENST00000565922 MED7O43513 233 aa20.86■□□□□ 0.93
CMTM3-211ENST00000565922 ATG13O75143 517 aa20.86■□□□□ 0.93
CMTM3-211ENST00000565922 CYP17A1P05093 508 aa20.86■□□□□ 0.93
CMTM3-211ENST00000565922 BRD2P25440 801 aaKnown RBP20.86■□□□□ 0.93
CMTM3-211ENST00000565922 EEF1GP26641 437 aaKnown RBP20.86■□□□□ 0.93
CMTM3-211ENST00000565922 EIF2DP41214 584 aaKnown RBP20.86■□□□□ 0.93
CMTM3-211ENST00000565922 CXCL12P48061 93 aa20.86■□□□□ 0.93
CMTM3-211ENST00000565922 PGFP49763 221 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms