RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 F5H423 210 aaPredicted RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 PJA2O43164 708 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 LPXNO60711 386 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 BCAR3O75815 825 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 IGHDP01880 384 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 LILRA4P59901 499 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 HABP2Q14520 560 aaPredicted RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 SLC35G1Q2M3R5 365 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 EMC10Q5UCC4 262 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 VPS53Q5VIR6 699 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 CCDC174Q6PII3 467 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 ARMC9Q7Z3E5 817 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 PLEKHH3Q7Z736 793 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 AGBL3Q8NEM8 1001 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 DNERQ8NFT8 737 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 C8orf49Q96NF6 230 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 SLC46A1Q96NT5 459 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 TRPM5Q9NZQ8 1165 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 DDX19BQ9UMR2 479 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 CHST2Q9Y4C5 530 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 CEMIPQ8WUJ3 1361 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 GOLGA6L3A6NEY3 463 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 PYCARD-AS1I3L0S3 204 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 IPO8O15397 1037 aaKnown RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 WDHD1O75717 1129 aaPredicted RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 MTHFD1P11586 935 aaKnown RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 HTR3AP46098 478 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 GALNT1Q10472 559 aaPredicted RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 CRHR2Q13324 411 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 DAG1Q14118 895 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 HLTFQ14527 1009 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 GLIPR1L2Q4G1C9 344 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 TAF2Q6P1X5 1199 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 GLB1LQ6UWU2 654 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF783Q6ZMS7 281 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 LRRC55Q6ZSA7 311 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 PSD4Q8NDX1 1056 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 OR6B3Q8NGW1 331 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 BORCS6Q96GS4 357 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 HTATIP2Q9BUP3 242 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 SIDT1Q9NXL6 827 aaKnown RBP4.84□□□□□ -1.63
LINC00561-201ENST00000565815 CTTNBP2NLQ9P2B4 639 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 MID2Q9UJV3 735 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 COMMD10Q9Y6G5 202 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 APOL1O14791 398 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 AMHP03971 560 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 FGFR4P22455 802 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 PPM1AP35813 382 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 RPS19P39019 145 aaKnown RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 IFIT5Q13325 482 aaKnown RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ALDH1L2Q3SY69 923 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 B3GNTL1Q67FW5 361 aaPredicted RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 TAPT1Q6NXT6 567 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 TOGARAM2Q6ZUX3 1019 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 APBB1IPQ7Z5R6 666 aaPredicted RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 NACC2Q96BF6 587 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 MIEF2Q96C03 454 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 EIF2B4Q9UI10 523 aaKnown RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ITGB1BP2Q9UKP3 347 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 MAP3K15Q6ZN16 1313 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 A0A1W2PPC4 97 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 AQP12BA6NM10 295 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 BTBD11A6QL63 1104 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 RAB27BO00194 218 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 FRS3O43559 492 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ZNF623O75123 536 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 RASSF9O75901 435 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 IPO13O94829 963 aaKnown RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 IL18RAPO95256 599 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 VNN1O95497 513 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 A1BGP04217 495 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 FTH1P19P0C7X4 201 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 DGCR2P98153 550 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 MTHFSDQ2M296 383 aaKnown RBP4.83□□□□□ -1.64
LINC00561-201ENST00000565815 HSCBQ8IWL3 235 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ZFP28Q8NHY6 868 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 CPT1CQ8TCG5 803 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 CHST8Q9H2A9 424 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 PNPLA8Q9NP80 782 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ETAA1Q9NY74 926 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 XPR1Q9UBH6 696 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 ATP11BQ9Y2G3 1177 aa4.83□□□□□ -1.64
LINC00561-201ENST00000565815 A0A087WWL8 130 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 TEX33O43247 280 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 SUN1O94901 812 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 GNAI2P04899 355 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 SETSIPP0DME0 302 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 FDXRP22570 491 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 SLC25A3Q00325 362 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 CALD1Q05682 793 aaKnown RBP4.82□□□□□ -1.64
LINC00561-201ENST00000565815 PTCHD3Q3KNS1 767 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 SUGP1Q8IWZ8 645 aaKnown RBP4.82□□□□□ -1.64
LINC00561-201ENST00000565815 SMC5Q8IY18 1101 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms