RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 KCNV2Q8TDN2 545 aa17.65■□□□□ 0.42
USB1-211ENST00000565662 NELFBQ8WX92 580 aa17.65■□□□□ 0.42
USB1-211ENST00000565662 JAKMIP2Q96AA8 810 aa17.65■□□□□ 0.42
USB1-211ENST00000565662 GMIPQ9P107 970 aa17.65■□□□□ 0.42
USB1-211ENST00000565662 CFAP97Q9P2B7 532 aa17.65■□□□□ 0.42
USB1-211ENST00000565662 RIF1Q5UIP0 2472 aaKnown RBP17.64■□□□□ 0.42
USB1-211ENST00000565662 PAEPP09466 180 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 SETSIPP0DME0 302 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 ADH5P11766 374 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 ACO1P21399 889 aaKnown RBP17.64■□□□□ 0.41
USB1-211ENST00000565662 KIF11P52732 1056 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 SATB1Q01826 763 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 CBWD6Q4V339 395 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 CBWD3Q5JTY5 395 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 CBWD5Q5RIA9 395 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 FSTL4Q6MZW2 842 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 TTI2Q6NXR4 508 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 SYT13Q7L8C5 426 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 TRMT11Q7Z4G4 463 aaKnown RBP17.64■□□□□ 0.41
USB1-211ENST00000565662 ANKRD52Q8NB46 1076 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 WHAMMQ8TF30 809 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 RNF38Q9H0F5 515 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 OLA1Q9NTK5 396 aaKnown RBP17.64■□□□□ 0.41
USB1-211ENST00000565662 RBM12Q9NTZ6 932 aaKnown RBP17.64■□□□□ 0.41
USB1-211ENST00000565662 DACH1Q9UI36 760 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 DNMT3LQ9UJW3 386 aa17.64■□□□□ 0.41
USB1-211ENST00000565662 TRIM49BA6NDI0 452 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 RNF40O75150 1001 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 APODP05090 189 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 CYP17A1P05093 508 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 VDRP11473 427 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 PLA2G4AP47712 749 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 GALK1P51570 392 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 PMS1P54277 932 aaKnown RBP17.63■□□□□ 0.41
USB1-211ENST00000565662 MRPS21P82921 87 aaKnown RBP17.63■□□□□ 0.41
USB1-211ENST00000565662 COG7P83436 770 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 FOXK2Q01167 660 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 GCNT1Q02742 428 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 BST2Q10589 180 aaKnown RBP17.63■□□□□ 0.41
USB1-211ENST00000565662 DHCR24Q15392 516 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 PPP1R26Q5T8A7 1209 aaPredicted RBP17.63■□□□□ 0.41
USB1-211ENST00000565662 KLHL10Q6JEL2 608 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 HTR3DQ70Z44 454 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 ADGRG2Q8IZP9 1017 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 SLC4A11Q8NBS3 891 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 RIN3Q8TB24 985 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 SEMA4DQ92854 862 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 EEF2KMTQ96G04 330 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 TWNKQ96RR1 684 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 DCLK3Q9C098 648 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 SMPD4Q9NXE4 827 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 CHORDC1Q9UHD1 332 aaPredicted RBP17.63■□□□□ 0.41
USB1-211ENST00000565662 STRIP2Q9ULQ0 834 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.63■□□□□ 0.41
USB1-211ENST00000565662 USP3Q9Y6I4 520 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 KIAA1549LQ6ZVL6 1849 aa17.63■□□□□ 0.41
USB1-211ENST00000565662 OTOL1A6NHN0 477 aaPredicted RBP17.62■□□□□ 0.41
USB1-211ENST00000565662 HHLA1C9JL84 531 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 K7ESF4 209 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 XPO1O14980 1071 aaKnown RBP17.62■□□□□ 0.41
USB1-211ENST00000565662 HOXC11O43248 304 aaPredicted RBP17.62■□□□□ 0.41
USB1-211ENST00000565662 RAD23BP54727 409 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 ORC1Q13415 861 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 GAS6Q14393 721 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 MEA1Q16626 185 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 ZNF394Q53GI3 561 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 Q6ZS52 159 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 ENOSF1Q7L5Y1 443 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
USB1-211ENST00000565662 XPO6Q96QU8 1125 aaKnown RBP17.62■□□□□ 0.41
USB1-211ENST00000565662 PNKPQ96T60 521 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 CCSER2Q9H7U1 834 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
USB1-211ENST00000565662 RWDD2AQ9UIY3 292 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 CTNND2Q9UQB3 1225 aa17.62■□□□□ 0.41
USB1-211ENST00000565662 PTPRZ1P23471 2315 aaPredicted RBP17.62■□□□□ 0.41
USB1-211ENST00000565662 PPP1R3GB7ZBB8 358 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 BEST1O76090 585 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 EGFP01133 1207 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 AFPP02771 609 aaKnown RBP17.61■□□□□ 0.41
USB1-211ENST00000565662 GRIA2P42262 883 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 ZNF445P59923 1031 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 RAB41Q5JT25 222 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 TSSK4Q6SA08 328 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 TRIM59Q8IWR1 403 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 SCML4Q8N228 414 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 MLKLQ8NB16 471 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 LOXL4Q96JB6 756 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 TRIM62Q9BVG3 475 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 SPHK2Q9NRA0 654 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
USB1-211ENST00000565662 PRR5-ARHGAP8B1AHC4 643 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 ALDH1A2O94788 518 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 APBB3O95704 486 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 RETP07949 1114 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 RARGP13631 454 aa17.6■□□□□ 0.41
USB1-211ENST00000565662 CHKAP35790 457 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms