RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 WDFY4Q6ZS81 3184 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 SPECC1L-ADORA2AF8WAN1 911 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 DCNP07585 359 aaKnown RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 ATP5C1P36542 298 aaKnown RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 RPS9P46781 194 aaKnown RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 IFNAR2P48551 515 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 PGFP49763 221 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 PTPN5P54829 565 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 AMPD2Q01433 879 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 MYL5Q02045 173 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 TYRO3Q06418 890 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 FZD5Q13467 585 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 MEA1Q16626 185 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 EML3Q32P44 896 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 SCML4Q8N228 414 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 UBA3Q8TBC4 463 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 SLC35F5Q8WV83 523 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 SHC3Q92529 594 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 ZFRQ96KR1 1074 aaKnown RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 CDK5RAP1Q96SZ6 601 aaKnown RBP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 ZSWIM1Q9BR11 485 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.24■□□□□ 0.19
COMMD4-212ENST00000565517 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 OSER1Q9NX31 292 aa16.24■□□□□ 0.19
COMMD4-212ENST00000565517 A0A1W2PQH9 124 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 E2F8A0AVK6 867 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 TULP2O00295 520 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 MED7O43513 233 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-212ENST00000565517 ZBED1O96006 694 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 RALAP11233 206 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 KRT5P13647 590 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
COMMD4-212ENST00000565517 TKTL1P51854 596 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 KCNMA1Q12791 1236 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 TCF15Q12870 199 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 NR1H3Q13133 447 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 KLHL40Q2TBA0 621 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 DPY19L2P1Q6NXN4 242 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 GJB7Q6PEY0 223 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 SCD5Q86SK9 330 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 TADA2BQ86TJ2 420 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 CPA6Q8N4T0 437 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 HSFY1Q96LI6 401 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 NACA2Q9H009 215 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
COMMD4-212ENST00000565517 ECT2Q9H8V3 914 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 LRRC4Q9HBW1 653 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 SMPD4Q9NXE4 827 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 TBC1D14Q9P2M4 693 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 WNT6Q9Y6F9 365 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 MUC6Q6W4X9 2439 aa16.23■□□□□ 0.19
COMMD4-212ENST00000565517 CACNA1IQ9P0X4 2223 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 MYOFQ9NZM1 2061 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 OTOL1A6NHN0 477 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-212ENST00000565517 LRRC10BA6NIK2 292 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 BECN2A8MW95 431 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 PES1O00541 588 aaKnown RBP16.22■□□□□ 0.19
COMMD4-212ENST00000565517 NFATC1O95644 943 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 TPM2P07951 284 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 RARGP13631 454 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 ARSAP15289 507 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 SOX9P48436 509 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 APBA1Q02410 837 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 KRT31Q15323 416 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 ARHGAP44Q17R89 818 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 ADGRG2Q8IZP9 1017 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 EXOC4Q96A65 974 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 OTUB2Q96DC9 234 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 BPIFA3Q9BQP9 254 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 IER2Q9BTL4 223 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 KLF16Q9BXK1 252 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-212ENST00000565517 LINC00597Q9H2U6 94 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 CNGB3Q9NQW8 809 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 CFAP97Q9P2B7 532 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 NAGPAQ9UK23 515 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 DNAJC12Q9UKB3 198 aa16.22■□□□□ 0.19
COMMD4-212ENST00000565517 NDRG2Q9UN36 371 aaKnown RBP16.22■□□□□ 0.19
COMMD4-212ENST00000565517 M0QYV0 167 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 TRDMT1O14717 391 aaKnown RBP16.21■□□□□ 0.19
COMMD4-212ENST00000565517 TBX18O95935 607 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 CHRNB1P11230 501 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 NCAPHQ15003 741 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 DGKKQ5KSL6 1271 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 KLHDC7AQ5VTJ3 777 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 PMF1Q6P1K2 205 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 MAMSTRQ6ZN01 415 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 C1orf210Q8IVY1 113 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 TTC16Q8NEE8 873 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 ZNF606Q8WXB4 792 aa16.21■□□□□ 0.19
COMMD4-212ENST00000565517 SECISBP2LQ93073 1101 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms