RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 UBA1P22314 1058 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 PROZP22891 400 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 RPA3P35244 121 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 RPL22P35268 128 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 TCF7P36402 384 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 HADHAP40939 763 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 PNPLA4P41247 253 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 MAGEA6P43360 314 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 GCGRP47871 477 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 IREB2P48200 963 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CDK7P50613 346 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CLCN2P51788 898 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 PRKAA2P54646 552 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CDH6P55285 790 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 RPL7AP62424 266 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 AP2B1P63010 937 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 KCNJ2P63252 427 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CNTN2Q02246 1040 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 SLC25A11Q02978 314 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ASPHQ12797 758 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 KCTD2Q14681 263 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 KPNB1Q14974 876 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 INSCQ1MX18 579 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 TRMT5Q32P41 509 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 WDR72Q3MJ13 1102 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ANKRD20A2Q5SQ80 823 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 FAM102AQ5T9C2 384 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ANKRD20A1Q5TYW2 823 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ARMC3Q5W041 872 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 LMBRD2Q68DH5 695 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 SPOPLQ6IQ16 392 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 TLDC1Q6P9B6 456 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 LCLAT1Q6UWP7 414 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 SAMD7Q7Z3H4 446 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 LCA5Q86VQ0 697 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 XYLT1Q86Y38 959 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 C4orf33Q8N1A6 199 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ZSWIM2Q8NEG5 633 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 OR5B17Q8NGF7 314 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 TCP10LQ8TDR4 215 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CPT1BQ92523 772 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 NAF1Q96HR8 494 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 SH2D3AQ9BRG2 576 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 BRD8Q9H0E9 1235 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 C1orf21Q9H246 121 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 MROH8Q9H579 483 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ZWILCHQ9H900 591 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 DNAJC17Q9NVM6 304 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 NDE1Q9NXR1 346 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 NSMCE4AQ9NXX6 385 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ERAP1Q9NZ08 941 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 ZC3H7BQ9UGR2 993 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 DCDC2Q9UHG0 476 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 APOBEC2Q9Y235 224 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 LRRC42Q9Y546 428 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 PSMD3O43242 534 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 GLRA3O75311 464 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 CILPO75339 1184 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 RGS20O76081 388 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 ENDOD1O94919 500 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 APOA4P06727 396 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 SRGAP2CP0DJJ0 459 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 CCDC130P13994 396 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 PDGFRAP16234 1089 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 DPEP1P16444 411 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 MX2P20592 715 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 ATP6V1C1P21283 382 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 PRKCHP24723 683 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 DNAJB1P25685 340 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 MIPP30301 263 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 FOXN2P32314 431 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 RFC1P35251 1148 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-249ENST00000564606 ARL4AP40617 200 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 PTPN9P43378 593 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 ASPAP45381 313 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 RAD23BP54727 409 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 AIF1P55008 147 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 RPL26P61254 145 aaKnown RBP7.93□□□□□ -1.14
ATXN3-249ENST00000564606 CCNA1P78396 465 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 XIAPP98170 497 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 KLC1Q07866 573 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 INCA1Q0VD86 236 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 LAMC2Q13753 1193 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 TMEM132DQ14C87 1099 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 TAF1BQ53T94 588 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-249ENST00000564606 FSCBQ5H9T9 825 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 CELF3Q5SZQ8 465 aaKnown RBP7.93□□□□□ -1.14
ATXN3-249ENST00000564606 OR6B2Q6IFH4 312 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 CAPRIN2Q6IMN6 1127 aaKnown RBP7.93□□□□□ -1.14
ATXN3-249ENST00000564606 IRGCQ6NXR0 463 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 AAGABQ6PD74 315 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 MTHFD1LQ6UB35 978 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 TIFABQ6ZNK6 161 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 FASTKD5Q7L8L6 764 aaKnown RBP7.93□□□□□ -1.14
ATXN3-249ENST00000564606 OTOAQ7RTW8 1153 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 CLNKQ7Z7G1 428 aa7.93□□□□□ -1.14
ATXN3-249ENST00000564606 ZBTB33Q86T24 672 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms