RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 BRD9Q9H8M2 597 aa19.25■□□□□ 0.67
PKD1-227ENST00000564313 LRRC4Q9HBW1 653 aa19.25■□□□□ 0.67
PKD1-227ENST00000564313 TRPV5Q9NQA5 729 aa19.25■□□□□ 0.67
PKD1-227ENST00000564313 GMIPQ9P107 970 aa19.25■□□□□ 0.67
PKD1-227ENST00000564313 ARHGAP26Q9UNA1 814 aa19.25■□□□□ 0.67
PKD1-227ENST00000564313 FOXN3O00409 490 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 ZNF263O14978 683 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 CHADO15335 359 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 GPC5P78333 572 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 SLC7A9P82251 487 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 LRSAM1Q6UWE0 723 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 LUZP1Q86V48 1076 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 DDX42Q86XP3 938 aaKnown RBP eCLIP19.24■□□□□ 0.67
PKD1-227ENST00000564313 SCML4Q8N228 414 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 ARL14EPQ8N8R7 260 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 UBA3Q8TBC4 463 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 SLC35F5Q8WV83 523 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 SECISBP2LQ93073 1101 aaKnown RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 NKD2Q969F2 451 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 ZSWIM1Q9BR11 485 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 GANQ9H2C0 597 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 TSPY26PQ9H489 355 aa19.24■□□□□ 0.67
PKD1-227ENST00000564313 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 FAM207AQ9NSI2 230 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 CHORDC1Q9UHD1 332 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 AJAP1Q9UKB5 411 aaPredicted RBP19.24■□□□□ 0.67
PKD1-227ENST00000564313 HELZP42694 1942 aaKnown RBP19.23■□□□□ 0.67
PKD1-227ENST00000564313 F8VZ95 297 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 CYP26A1O43174 497 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 SERPINC1P01008 464 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 TKTL1P51854 596 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 POLR2FP61218 127 aaKnown RBP19.23■□□□□ 0.67
PKD1-227ENST00000564313 GRM2Q14416 872 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 SIX6OS1Q8N1H7 587 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 ZNF276Q8N554 614 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 STK32AQ8WU08 396 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 CYLDQ9NQC7 956 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 CNGB3Q9NQW8 809 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 CLIC5Q9NZA1 410 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 PCDHGC3Q9UN70 934 aa19.23■□□□□ 0.67
PKD1-227ENST00000564313 A0A1B0GTH6 734 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 ZBED1O96006 694 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 CFHP08603 1231 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 RALAP11233 206 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 GDI1P31150 447 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 CLCN1P35523 988 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 ACADSBP45954 432 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 USP4Q13107 963 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 PM20D1Q6GTS8 502 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 CC2D1AQ6P1N0 951 aaPredicted RBP19.22■□□□□ 0.67
PKD1-227ENST00000564313 KLHDC10Q6PID8 442 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 FMNL3Q8IVF7 1028 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 RSPRY1Q96DX4 576 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 SHDQ96IW2 340 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 SPAG5Q96R06 1193 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 SLC22A12Q96S37 553 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 CYP2S1Q96SQ9 504 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 NACA2Q9H009 215 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 CEP83Q9Y592 693 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 GVINP1Q7Z2Y8 2422 aa19.22■□□□□ 0.67
PKD1-227ENST00000564313 A0A1W2PQC6 194 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 MED19A0JLT2 244 aaPredicted RBP19.21■□□□□ 0.67
PKD1-227ENST00000564313 TULP2O00295 520 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 TLR5O60602 858 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 FBXO21O94952 628 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 MBL2P11226 248 aaPredicted RBP19.21■□□□□ 0.67
PKD1-227ENST00000564313 KRT9P35527 623 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 GPD2P43304 727 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 KLK7P49862 253 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 ADIGQ0VDE8 80 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 ZNF77Q15935 545 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 MSANTD3Q96H12 275 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 NOX5Q96PH1 765 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 SMG9Q9H0W8 520 aaKnown RBP19.21■□□□□ 0.67
PKD1-227ENST00000564313 LHX5Q9H2C1 402 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 ARHGEF3Q9NR81 526 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 NAGPAQ9UK23 515 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 KIF26AQ9ULI4 1882 aaPredicted RBP19.21■□□□□ 0.67
PKD1-227ENST00000564313 CCL26Q9Y258 94 aa19.21■□□□□ 0.67
PKD1-227ENST00000564313 DMXL1Q9Y485 3027 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 A0A1W2PQH9 124 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 SART1O43290 800 aaKnown RBP19.2■□□□□ 0.66
PKD1-227ENST00000564313 COCHO43405 550 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 CALCAP01258 141 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 ATP5C1P36542 298 aaKnown RBP19.2■□□□□ 0.66
PKD1-227ENST00000564313 STAT1P42224 750 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 RPL34P49207 117 aaKnown RBP19.2■□□□□ 0.66
PKD1-227ENST00000564313 MLLT6P55198 1093 aaPredicted RBP19.2■□□□□ 0.66
PKD1-227ENST00000564313 JAM2P57087 298 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 SNX16P57768 344 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 PRKCQQ04759 706 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 GOLGA8FQ08AF8 430 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 GOLGA8DPQ0D2H9 430 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 MTF1Q14872 753 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 PMF1Q6P1K2 205 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 C1orf228Q6PIY5 440 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 SLC47A2Q86VL8 602 aa19.2■□□□□ 0.66
PKD1-227ENST00000564313 CSGALNACT1Q8TDX6 532 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms