RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MRPL47Q9HD33 250 aaKnown RBP17.82■□□□□ 0.44
CMTM3-208ENST00000564247 WDR6Q9NNW5 1121 aaKnown RBP17.82■□□□□ 0.44
CMTM3-208ENST00000564247 CNOT8Q9UFF9 292 aaKnown RBP17.82■□□□□ 0.44
CMTM3-208ENST00000564247 FAM86C2PA6NEL3 165 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 PJA2O43164 708 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 SEC24AO95486 1093 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 VNN2O95498 520 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 C8AP07357 584 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 HNRNPA1P09651 372 aaKnown RBP eCLIP17.81■□□□□ 0.44
CMTM3-208ENST00000564247 HOXA9P31269 272 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 CACNA2D1P54289 1103 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 PLD1Q13393 1074 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 ARHGAP29Q52LW3 1261 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 NUP93Q8N1F7 819 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 ACSF2Q96CM8 615 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-208ENST00000564247 SPATA17Q96L03 361 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 THAP2Q9H0W7 228 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 PIDD1Q9HB75 910 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 AVENQ9NQS1 362 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-208ENST00000564247 PARVAQ9NVD7 372 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 COMMD8Q9NX08 183 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 TRMT1Q9NXH9 659 aaKnown RBP17.81■□□□□ 0.44
CMTM3-208ENST00000564247 EHD2Q9NZN4 543 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 MYO1AQ9UBC5 1043 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 DOCK6Q96HP0 2047 aa17.81■□□□□ 0.44
CMTM3-208ENST00000564247 CLUHO75153 1309 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 PRR33A8MZF0 331 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 E5RJQ4 531 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 PIK3R2O00459 728 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 FBXO21O94952 628 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-208ENST00000564247 ERBB2P04626 1255 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 POU2F2P09086 479 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 TKTL1P51854 596 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 EPHB3P54753 998 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 PTP4A2Q12974 167 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 VEPH1Q14D04 833 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 TAF12Q16514 161 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
CMTM3-208ENST00000564247 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 PPM1LQ5SGD2 360 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 CYP4A22Q5TCH4 519 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 ZNF662Q6ZS27 426 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 ZSCAN30Q86W11 494 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 SCUBE3Q8IX30 993 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 RHOT2Q8IXI1 618 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 CCAR2Q8N163 923 aaKnown RBP17.8■□□□□ 0.44
CMTM3-208ENST00000564247 SLC7A14Q8TBB6 771 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 CALR3Q96L12 384 aaKnown RBP17.8■□□□□ 0.44
CMTM3-208ENST00000564247 SELENOOQ9BVL4 669 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 SCINQ9Y6U3 715 aa17.8■□□□□ 0.44
CMTM3-208ENST00000564247 DOCK8Q8NF50 2099 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 TECTAO75443 2155 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 HHLA1C9JL84 531 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 SART1O43290 800 aaKnown RBP17.79■□□□□ 0.44
CMTM3-208ENST00000564247 CYP1A2P05177 515 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 RRM1P23921 792 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
CMTM3-208ENST00000564247 NOP2P46087 812 aaKnown RBP17.79■□□□□ 0.44
CMTM3-208ENST00000564247 NAP1L1P55209 391 aaKnown RBP17.79■□□□□ 0.44
CMTM3-208ENST00000564247 ZXDAP98168 799 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 ADIGQ0VDE8 80 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 RAB41Q5JT25 222 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 EFHC1Q5JVL4 640 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 DNAJC24Q6P3W2 148 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 DENND5BQ6ZUT9 1274 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 PHLDB2Q86SQ0 1253 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 XYLT1Q86Y38 959 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 TTC9BQ8N6N2 239 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 CRISPLD1Q9H336 500 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 FBXO44Q9H4M3 255 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 LZTFL1Q9NQ48 299 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 CNGB3Q9NQW8 809 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 KCND1Q9NSA2 647 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 CTTNBP2NLQ9P2B4 639 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 UVRAGQ9P2Y5 699 aa17.79■□□□□ 0.44
CMTM3-208ENST00000564247 A0A0A6YYK5 440 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-208ENST00000564247 RCCD1A6NED2 376 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 BTNL10A8MVZ5 291 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 GOLGA8SH3BPF8 625 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 XYLBO75191 536 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 SOAT2O75908 522 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 ZBED1O96006 694 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 LRG1P02750 347 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 GPR15P49685 360 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 GSCP56915 257 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-208ENST00000564247 SLC6A3Q01959 620 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 SDHAF4Q5VUM1 108 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 PLEKHA7Q6IQ23 1121 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 DCUN1D2Q6PH85 259 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 ITIH5Q86UX2 942 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 C3orf20Q8ND61 904 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 SLC35G2Q8TBE7 412 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 GIPC2Q8TF65 315 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 RFFLQ8WZ73 363 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 GOLGA1Q92805 767 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 MCRS1Q96EZ8 462 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 ULBP1Q9BZM6 244 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 LACRTQ9GZZ8 138 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms