RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
CCNF-203ENST00000564236 DDX1Q92499 740 aaKnown RBP17.7■□□□□ 0.42
CCNF-203ENST00000564236 CHAMP1Q96JM3 812 aa17.7■□□□□ 0.42
CCNF-203ENST00000564236 FAM124BQ9H5Z6 455 aaPredicted RBP17.7■□□□□ 0.42
CCNF-203ENST00000564236 CCSER2Q9H7U1 834 aa17.7■□□□□ 0.42
CCNF-203ENST00000564236 GMIPQ9P107 970 aa17.7■□□□□ 0.42
CCNF-203ENST00000564236 SCML2Q9UQR0 700 aa17.7■□□□□ 0.42
CCNF-203ENST00000564236 TLR5O60602 858 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 CILPO75339 1184 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 RHOBTB1O94844 696 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 KAT7O95251 611 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 ADRB1P08588 477 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 FAM200BP0CF97 657 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 TRIM21P19474 475 aaKnown RBP17.69■□□□□ 0.42
CCNF-203ENST00000564236 RPL13P26373 211 aaKnown RBP17.69■□□□□ 0.42
CCNF-203ENST00000564236 PSMC2P35998 433 aaKnown RBP17.69■□□□□ 0.42
CCNF-203ENST00000564236 MPLP40238 635 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 SLC6A11P48066 632 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 PGFP49763 221 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 GAD2Q05329 585 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 IFRD2Q12894 506 aaPredicted RBP17.69■□□□□ 0.42
CCNF-203ENST00000564236 ELF2Q15723 593 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 LY6G5CQ5SRR4 150 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 CLEC20AQ6ZU45 233 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 HTR3DQ70Z44 454 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 FAM186BQ8IYM0 893 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 ZNF276Q8N554 614 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 IL17RCQ8NAC3 791 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 OLIG1Q8TAK6 271 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 TAS1R2Q8TE23 839 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 WHAMMQ8TF30 809 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 TWNKQ96RR1 684 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 NT5C1AQ9BXI3 368 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 IMPG2Q9BZV3 1241 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 NIF3L1Q9GZT8 377 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 GOLPH3LQ9H4A5 285 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 TMEM8AQ9HCN3 771 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 TLR8Q9NR97 1041 aaKnown RBP17.69■□□□□ 0.42
CCNF-203ENST00000564236 VPS45Q9NRW7 570 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 PCDHA5Q9Y5H7 936 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 MYO16Q9Y6X6 1858 aa17.69■□□□□ 0.42
CCNF-203ENST00000564236 ZNF202O95125 648 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 APODP05090 189 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 GCLMP48507 274 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 MAP3K7CLP57077 242 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 SF3A2Q15428 464 aaKnown RBP17.68■□□□□ 0.42
CCNF-203ENST00000564236 PREPLQ4J6C6 727 aaPredicted RBP17.68■□□□□ 0.42
CCNF-203ENST00000564236 COBLL1Q53SF7 1204 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 C2orf27AQ580R0 203 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 PMS2CLQ68D20 193 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 BBS7Q8IWZ6 715 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 KLF16Q9BXK1 252 aaPredicted RBP17.68■□□□□ 0.42
CCNF-203ENST00000564236 ARHGEF4Q9NR80 690 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 SPHK2Q9NRA0 654 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 SH3BP1Q9Y3L3 701 aa17.68■□□□□ 0.42
CCNF-203ENST00000564236 BCLAF3A2AJT9 711 aaKnown RBP17.67■□□□□ 0.42
CCNF-203ENST00000564236 ANTXRLA6NF34 631 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 KRT13P13646 458 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 HNRNPLP14866 589 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCNF-203ENST00000564236 SEC13P55735 322 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 ORC1Q13415 861 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 ADAM9Q13443 819 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 AASDHQ4L235 1098 aaPredicted RBP17.67■□□□□ 0.42
CCNF-203ENST00000564236 USP39Q53GS9 565 aaKnown RBP17.67■□□□□ 0.42
CCNF-203ENST00000564236 TMEM92Q6UXU6 159 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 GPRIN1Q7Z2K8 1008 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 SFTPA1Q8IWL2 248 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 C12orf50Q8NA57 414 aaPredicted RBP17.67■□□□□ 0.42
CCNF-203ENST00000564236 MDGA1Q8NFP4 955 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 CYFIP2Q96F07 1278 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 MARK1Q9P0L2 795 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 STARD13Q9Y3M8 1113 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 EML5Q05BV3 1969 aa17.67■□□□□ 0.42
CCNF-203ENST00000564236 SCAMP3O14828 347 aaKnown RBP17.66■□□□□ 0.42
CCNF-203ENST00000564236 DCLK1O15075 740 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 ADAM23O75077 832 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 KIF11P52732 1056 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 PPM1JQ5JR12 505 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 EOGTQ5NDL2 527 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 KRT39Q6A163 491 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 CCDC186Q7Z3E2 898 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 ZC3H3Q8IXZ2 948 aaKnown RBP17.66■□□□□ 0.42
CCNF-203ENST00000564236 TTC39CQ8N584 583 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 ALLCQ8N6M5 410 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 WBP2Q969T9 261 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 RXFP3Q9NSD7 469 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 OSER1Q9NX31 292 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 MAPK8IP1Q9UQF2 711 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 USP3Q9Y6I4 520 aa17.66■□□□□ 0.42
CCNF-203ENST00000564236 SGK1O00141 431 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 CACNG3O60359 315 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 TULP3O75386 442 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 ALDH1A2O94788 518 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 CLSTN1O94985 981 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 ATP5C1P36542 298 aaKnown RBP17.65■□□□□ 0.42
CCNF-203ENST00000564236 PSEN1P49768 467 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms