RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 O00370 1275 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 LAMTOR5O43504 91 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 TPM2P07951 284 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 RALAP11233 206 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 EEF1GP26641 437 aaKnown RBP14.1□□□□□ -0.15
CLK3-213ENST00000563842 KCNJ12Q14500 433 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 ANGPT1Q15389 498 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 STX1AQ16623 288 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 VWA3BQ502W6 1294 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 RAB41Q5JT25 222 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 KLHDC10Q6PID8 442 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 LCLAT1Q6UWP7 414 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 GPRIN1Q7Z2K8 1008 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 C1orf210Q8IVY1 113 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 SYNPOQ8N3V7 929 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 ZNF276Q8N554 614 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 TTC8Q8TAM2 541 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 OTUB2Q96DC9 234 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 CRACR2AQ9BSW2 395 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 NDST4Q9H3R1 872 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 ECT2Q9H8V3 914 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 LMAN1LQ9HAT1 526 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 CYLDQ9NQC7 956 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 SPATA6Q9NWH7 488 aaPredicted RBP14.1□□□□□ -0.15
CLK3-213ENST00000563842 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 CLIC5Q9NZA1 410 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 APEX2Q9UBZ4 518 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 CNTN6Q9UQ52 1028 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 SH3BP1Q9Y3L3 701 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 NFE2L3Q9Y4A8 694 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 WNT6Q9Y6F9 365 aa14.1□□□□□ -0.15
CLK3-213ENST00000563842 WDFY4Q6ZS81 3184 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 PES1O00541 588 aaKnown RBP14.09□□□□□ -0.15
CLK3-213ENST00000563842 CYP26A1O43174 497 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 MED7O43513 233 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 RARGP13631 454 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 KRT5P13647 590 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 ARSAP15289 507 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 PLA2G4AP47712 749 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 SOX9P48436 509 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 PDE4CQ08493 712 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 GRSF1Q12849 480 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLK3-213ENST00000563842 PPP2R5DQ14738 602 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 EML3Q32P44 896 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 RIN3Q8TB24 985 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 KAT5Q92993 513 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 KREMEN1Q96MU8 473 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 CHRDQ9H2X0 955 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 CFAP97Q9P2B7 532 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 DNMT3LQ9UJW3 386 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
CLK3-213ENST00000563842 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLK3-213ENST00000563842 A0A1W2PQH9 124 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 RNF225M0QZC1 329 aaPredicted RBP14.08□□□□□ -0.16
CLK3-213ENST00000563842 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
CLK3-213ENST00000563842 ZBED1O96006 694 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 CHRNB1P11230 501 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 SLC9A1P19634 815 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 PTMSP20962 102 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 PON1P27169 355 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 GJA4P35212 333 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 TKTL1P51854 596 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 ZNF132P52740 706 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 ZXDBP98169 803 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 FZD5Q13467 585 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 PON2Q15165 354 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 MEA1Q16626 185 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 TCP11X2Q5H9J9 407 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 PM20D1Q6GTS8 502 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 TXNDC11Q6PKC3 985 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 MAMSTRQ6ZN01 415 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 SIX6OS1Q8N1H7 587 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 KCTD13Q8WZ19 329 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 SAMSN1Q9NSI8 373 aaKnown RBP14.08□□□□□ -0.16
CLK3-213ENST00000563842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLK3-213ENST00000563842 LSM7Q9UK45 103 aaKnown RBP14.08□□□□□ -0.16
CLK3-213ENST00000563842 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.16
CLK3-213ENST00000563842 MYO18AQ92614 2054 aaKnown RBP14.08□□□□□ -0.16
CLK3-213ENST00000563842 M0QYV0 167 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 ADH1CP00326 375 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 DRD1P21728 446 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 COG7P83436 770 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 ARHGAP44Q17R89 818 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 PKDCCQ504Y2 493 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 HSP90AA4PQ58FG1 418 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 C10orf120Q5SQS8 335 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 ZC3H14Q6PJT7 736 aaKnown RBP14.07□□□□□ -0.16
CLK3-213ENST00000563842 ADGRG2Q8IZP9 1017 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 SCML4Q8N228 414 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 CCDC26Q8TAB7 109 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms