RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 TEX33O43247 280 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 XPOTO43592 962 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 STX10O60499 249 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ZC3H11AO75152 810 aaKnown RBP eCLIP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 TNNC2P02585 160 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ITGB3P05106 788 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ITGB1P05556 798 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 CA3P07451 260 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 LAG3P18627 525 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 MAP4P27816 1152 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 RPL9P32969 192 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ASPAP45381 313 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 OR1G1P47890 313 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 FMO5P49326 533 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 CLCNKBP51801 687 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 BCAR1P56945 870 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 MYL6P60660 151 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ERVK-21P61565 698 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 RBP5P82980 135 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 SMAD3P84022 425 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 MYL7Q01449 175 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 TAP1Q03518 808 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 RNASELQ05823 741 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 BIRC3Q13489 604 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 VWA3BQ502W6 1294 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ZC3H12BQ5HYM0 836 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 KRT39Q6A163 491 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 SPOPLQ6IQ16 392 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 KCNT2Q6UVM3 1135 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 LIMS2Q7Z4I7 341 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 USP37Q86T82 979 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 THNSL2Q86YJ6 484 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 TRIM42Q8IWZ5 723 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 RNF168Q8IYW5 571 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 SLC39A11Q8N1S5 342 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 FIBCD1Q8N539 461 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 LRRC52Q8N7C0 313 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 COLGALT1Q8NBJ5 622 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 LMO3Q8TAP4 145 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 TAS1R2Q8TE23 839 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 CACTINQ8WUQ7 758 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ELMO3Q96BJ8 720 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 MFSD3Q96ES6 412 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 UROC1Q96N76 676 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ZNF558Q96NG5 402 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 NAP1L5Q96NT1 182 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 FAM83CQ9BQN1 747 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 C17orf80Q9BSJ5 609 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 VN1R3Q9BXE9 311 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 NKX2-4Q9H2Z4 354 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 NDST4Q9H3R1 872 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ACSS3Q9H6R3 686 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 MMRN2Q9H8L6 949 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 APOBEC3GQ9HC16 384 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 SIX2Q9NPC8 291 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 ITGA11Q9UKX5 1188 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 AGAP1Q9UPQ3 857 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 SIK3Q9Y2K2 1263 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 RAXQ9Y2V3 346 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 PRG3Q9Y2Y8 225 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 CUL9Q8IWT3 2517 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 RALGAPA2Q2PPJ7 1873 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 SZT2Q5T011 3432 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 FSD2A1L4K1 749 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 GTPBP10A4D1E9 387 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 I3L4J1 428 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 DYRK3O43781 588 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 N4BP1O75113 896 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 RFPL3O75679 317 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 B3GAT3O94766 335 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 ASS1P00966 412 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 SLC9A1P19634 815 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 GNALP38405 381 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 PBX1P40424 430 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 PIK3CAP42336 1068 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 BRCC3P46736 316 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 TAF6P49848 677 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 KLK7P49862 253 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 FXR1P51114 621 aaKnown RBP eCLIP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 LILRA4P59901 499 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 TPM4P67936 248 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 APBA1Q02410 837 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 RING1Q06587 406 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 SEPT6Q14141 434 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 INPP5AQ14642 412 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 RAB30Q15771 203 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 PTPN21Q16825 1174 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 LRIT3Q3SXY7 679 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 TIGD5Q53EQ6 642 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 SPOUT1Q5T280 376 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 DCLRE1AQ6PJP8 1040 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 SARM1Q6SZW1 724 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 CCDC81Q6ZN84 652 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 CREBRFQ8IUR6 639 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 ARHGEF19Q8IW93 802 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 FBXL13Q8NEE6 735 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 HASPINQ8TF76 798 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 FBLIM1Q8WUP2 373 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms