RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 A1BGP04217 495 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 PHKG2P15735 406 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 ACVR2AP27037 513 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 MCM5P33992 734 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 PGDP52209 483 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 FMO1Q01740 532 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 STK3Q13188 491 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 LARS2Q15031 903 aaKnown RBP4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 NXNQ6DKJ4 435 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 TMEM65Q6PI78 240 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 SHC4Q6S5L8 630 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 TCEAL8Q8IYN2 117 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 NANOGP1Q8N7R0 232 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 FAM156AQ8NDB6 213 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 OSR1Q8TAX0 266 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 LRTOMTQ8WZ04 291 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 MAP4K1Q92918 833 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 FAM204AQ9H8W3 233 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 MGAT4CQ9UBM8 478 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 RIMKLBQ9ULI2 386 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 TMPRSS11DO60235 418 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 RNF8O76064 485 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 S100BP04271 92 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 PARP1P09874 1014 aaKnown RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 TXNP10599 105 aaKnown RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 ATF7P17544 494 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 HOXD9P28356 352 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 CPT1AP50416 773 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 CCT4P50991 539 aaKnown RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 PLCD1P51178 756 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 CACNB3P54284 484 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 GHRHRQ02643 423 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 LAMB3Q13751 1172 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 SLC29A2Q14542 456 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 SEC23BQ15437 767 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 ZNF260Q3ZCT1 412 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 RNF220Q5VTB9 566 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 DENND2CQ68D51 928 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 AWAT2Q6E213 333 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 DCDC5Q6ZRR9 648 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 SESTD1Q86VW0 696 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 KRT73Q86Y46 540 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 METTL25Q8N6Q8 603 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 C11orf44Q8N8P7 122 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 NRACQ8N912 160 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 COQ8BQ96D53 544 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 HMCESQ96FZ2 354 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 TMEM79Q9BSE2 394 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 CHST8Q9H2A9 424 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 DHX36Q9H2U1 1008 aaKnown RBP4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 TRIM36Q9NQ86 728 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 MTMR4Q9NYA4 1195 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 OGDHLQ9ULD0 1010 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 ASAP1Q9ULH1 1129 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 EID1Q9Y6B2 187 aa4.03□□□□□ -1.76
HMGB1P33-201ENST00000563485 SOCS2O14508 198 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 NTN1O95631 604 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 FGBP02675 491 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 MYF5P13349 255 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 TPH1P17752 444 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 NTSR1P30989 418 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 GATMP50440 423 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 DEUP1Q05D60 604 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 KCNB1Q14721 858 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 KCNAB1Q14722 419 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 POLD3Q15054 466 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 C4orf46Q504U0 113 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 TMTC4Q5T4D3 741 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 CCDC149Q6ZUS6 474 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 C16orf52Q8NHV5 167 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 PIGOQ8TEQ8 1089 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 JDP2Q8WYK2 163 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 CUL5Q93034 780 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 APIPQ96GX9 242 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 HS6ST2Q96MM7 605 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 LRRC27Q9C0I9 530 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 ZNF287Q9HBT7 754 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 ITGB1BP2Q9UKP3 347 aa4.02□□□□□ -1.77
HMGB1P33-201ENST00000563485 H3BNC9 293 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 TPP1O14773 563 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 KCNAB3O43448 404 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 PRF1P14222 555 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 CARSP49589 748 aaKnown RBP4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 GRM3Q14832 879 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 RBMS2Q15434 407 aaKnown RBP4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 KIAA0753Q2KHM9 967 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 DARS2Q6PI48 645 aaKnown RBP4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 RANBP10Q6VN20 620 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 USP49Q70CQ1 688 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 UNC13DQ70J99 1090 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 LIX1LQ8IVB5 337 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 YAF2Q8IY57 180 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 EDC3Q96F86 508 aaKnown RBP4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 SIGLEC11Q96RL6 698 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 WACQ9BTA9 647 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 GAR1Q9NY12 217 aaKnown RBP4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 DKK4Q9UBT3 224 aa4.01□□□□□ -1.77
HMGB1P33-201ENST00000563485 VPS51Q9UID3 782 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms