RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CTC1Q2NKJ3 1217 aa6.46□□□□□ -1.37
CLK3-212ENST00000563418 LRRC17Q8N6Y2 441 aa6.46□□□□□ -1.37
CLK3-212ENST00000563418 OR7G1Q8NGA0 311 aa6.46□□□□□ -1.37
CLK3-212ENST00000563418 ARHGEF26Q96DR7 871 aa6.46□□□□□ -1.37
CLK3-212ENST00000563418 ENTPD7Q9NQZ7 604 aa6.46□□□□□ -1.37
CLK3-212ENST00000563418 GMIPQ9P107 970 aa6.46□□□□□ -1.37
CLK3-212ENST00000563418 UTYO14607 1347 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 FADS2P1A8MWK0 482 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 RNF103O00237 685 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 SLC18A1P54219 525 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 POLD3Q15054 466 aaPredicted RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 ANKDD1AQ495B1 522 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 FAM47CQ5HY64 1035 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 GPR107Q5VW38 600 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 SLCO6A1Q86UG4 719 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 PAFAH2Q99487 392 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 TCF7L2Q9NQB0 619 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 TET3O43151 1660 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 NEURL1BA8MQ27 555 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 DRAP1Q14919 205 aaPredicted RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 ITPRIPL1Q6GPH6 555 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 RASSF6Q6ZTQ3 369 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 STK32CQ86UX6 486 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CLHC1Q8NHS4 586 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CCDC126Q96EE4 140 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 YTHDF1Q9BYJ9 559 aaKnown RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 SPATA2Q9UM82 520 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 GYS1P13807 737 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 NPTX2P47972 431 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 MMRN1Q13201 1228 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 KHDC1Q4VXA5 237 aaKnown RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 SEL1L3Q68CR1 1132 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 ECHDC2Q86YB7 292 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 NUAK2Q9H093 628 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CD320Q9NPF0 282 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CLRN2A0PK11 232 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 SLC22A1O15245 554 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 PRDM1O75626 825 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 SERPINE1P05121 402 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 HNRNPH3P31942 346 aaKnown RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 PHKA2P46019 1235 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 PRKG1Q13976 671 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 TAF12Q16514 161 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CCDC81Q6ZN84 652 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 SLC26A11Q86WA9 606 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 GLYCTKQ8IVS8 523 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 ZHX1-C8orf76Q96EF9 292 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 C7orf26Q96N11 449 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 YME1L1Q96TA2 773 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 MUC13Q9H3R2 512 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 DNAJC11Q9NVH1 559 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 DUSP10Q9Y6W6 482 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 PRKD3O94806 890 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 PRKAR1AP10644 381 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 EVA1CP58658 441 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CHRNB3Q05901 458 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 IFRD2Q12894 506 aaPredicted RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 PTPAQ15257 358 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 MROH9Q5TGP6 573 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 ZCCHC8Q6NZY4 707 aaKnown RBP6.46□□□□□ -1.38
CLK3-212ENST00000563418 POTEHQ6S545 545 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 APPL2Q8NEU8 664 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 EBF3Q9H4W6 596 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 CXorf21Q9HAI6 301 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 B3GNT3Q9Y2A9 372 aa6.46□□□□□ -1.38
CLK3-212ENST00000563418 KMOO15229 486 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 AKAP5P24588 427 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 HADHAP40939 763 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 RXRGP48443 463 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 CCT8P50990 548 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 CLPPQ16740 277 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 POMGNT1Q8WZA1 660 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 COPS7BQ9H9Q2 264 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 EHD3Q9NZN3 535 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ATP8B3O60423 1300 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 GSTT2P0CG29 244 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 GSTT2BP0CG30 244 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 NADK2Q4G0N4 442 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 TBCELQ5QJ74 424 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 RTKNQ9BST9 563 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 GPHNQ9NQX3 736 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 TBC1D14Q9P2M4 693 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 SUCOQ9UBS9 1254 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 ALG6Q9Y672 507 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 FLT1P17948 1338 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 CLDN3O15551 220 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 TNNI1P19237 187 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ERP29P30040 261 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 COASYQ13057 564 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 DMP1Q13316 513 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 C1DQ13901 141 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZNF285Q96NJ3 590 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ACCSQ96QU6 501 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 TCF12Q99081 682 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZNF556Q9HAH1 456 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PEX16Q9Y5Y5 336 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 B3GALNT1O75752 331 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms