RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SCN4BQ8IWT1 228 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 NAT16Q8N8M0 369 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 CADM4Q8NFZ8 388 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 CXorf38Q8TB03 319 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 WBP2Q969T9 261 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 TOE1Q96GM8 510 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 DUSP9Q99956 384 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 GPR174Q9BXC1 333 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 ITM2CQ9NQX7 267 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 SMPD4Q9NXE4 827 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 CFAP97Q9P2B7 532 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 LRWD1Q9UFC0 647 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 DNM3Q9UQ16 869 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 USP9XQ93008 2570 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 NYNRINQ9P2P1 1898 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 E2F8A0AVK6 867 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 METTL12A8MUP2 240 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 WASH3PC4AMC7 463 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 TULP1O00294 542 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 GABRDO14764 452 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 RRP8O43159 456 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 PCDHGA12O60330 932 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 ATP2C2O75185 946 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 IGLV3-19P01714 112 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 ACOT2P49753 483 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 LIG4P49917 911 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 SMTNP53814 917 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 CXADRP78310 365 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 SEMG2Q02383 582 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 RAD51AP2Q09MP3 1159 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 IL17AQ16552 155 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 KIF19Q2TAC6 998 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 CRELD2Q6UXH1 353 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 TMEM25Q86YD3 366 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 SPACA3Q8IXA5 215 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 NSUN7Q8NE18 718 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 TTC9Q92623 222 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 OTUB2Q96DC9 234 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 BICD1Q96G01 975 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 CEP295NLQ96MC4 621 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 FIZ1Q96SL8 496 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 MSTO1Q9BUK6 570 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 TRIM9Q9C026 710 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 NRSN2Q9GZP1 204 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 MIR1-1HGQ9H1L0 117 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 IGSF5Q9NSI5 407 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 GDAP2Q9NXN4 497 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 TRPM5Q9NZQ8 1165 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 TBC1D14Q9P2M4 693 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 DEC1Q9P2X7 70 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 PCDHGA1Q9Y5H4 931 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 SNX11Q9Y5W9 270 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 BOD1L1Q8NFC6 3051 aa8.25□□□□□ -1.09
HERPUD1-206ENST00000563343 NPHP3-ACAD11A0A0J9YXS1 232 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 MEI4A8MW99 385 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 TISP43B9A030 160 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 ANKRD63C9JTQ0 380 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 GFRA2O00451 464 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 HNRNPDLO14979 420 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 TRAK2O60296 914 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 GRK6P43250 576 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 FOSBP53539 338 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 SLC12A3P55017 1021 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 NOP14P78316 857 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 MYL7Q01449 175 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 TARDBPQ13148 414 aaKnown RBP eCLIP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 SUZ12Q15022 739 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 FUT11Q495W5 492 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 ARSHQ5FYA8 562 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 HYIQ5T013 277 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 C6orf118Q5T5N4 469 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 KIAA1324Q6UXG2 1013 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 DENND5BQ6ZUT9 1274 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 LIMS2Q7Z4I7 341 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 ERICH1Q86X53 443 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 DDX42Q86XP3 938 aaKnown RBP eCLIP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 SPATA2LQ8IUW3 424 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 BBS7Q8IWZ6 715 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 CHPFQ8IZ52 775 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 SYT2Q8N9I0 419 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 BAP1Q92560 729 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 ZNF560Q96MR9 790 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 CRTAC1Q9NQ79 661 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 SPHK2Q9NRA0 654 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 TMEM30AQ9NV96 361 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 EIF2B4Q9UI10 523 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 KCNG1Q9UIX4 513 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
HERPUD1-206ENST00000563343 H0Y8X5 98 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 H0YCG3 227 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 CBX4O00257 560 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 KCNK3O14649 394 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 CACNG3O60359 315 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 BRINP1O60477 761 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms