RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CNTN2Q02246 1040 aa14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 KCTD17Q8N5Z5 321 aa14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 BTBD9Q96Q07 612 aa14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 VPS11Q9H270 941 aa14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 KCND2Q9NZV8 630 aa14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 KIAA1522Q9P206 1035 aaPredicted RBP14.59□□□□□ -0.07
GTF3C1-203ENST00000562609 MEI4A8MW99 385 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 ADM5C9JUS6 153 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 ADAM23O75077 832 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 SERPINB6P35237 376 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 GCLMP48507 274 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 TMED10P49755 219 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 ZNF200P98182 395 aaPredicted RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 PFKPQ01813 784 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 GHRHRQ02643 423 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 STXBP4Q6ZWJ1 553 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 NIPA1Q7RTP0 329 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 MARVELD2Q8N4S9 558 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 VPS50Q96JG6 964 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 PPP1R10Q96QC0 940 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 R3HDMLQ9H3Y0 253 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 PLGRKTQ9HBL7 147 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 DMAC2Q9NW81 257 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 THEGQ9P2T0 379 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 TAGLN3Q9UI15 199 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 FAM32AQ9Y421 112 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 LTBP3Q9NS15 1303 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 A0A088AWK7 358 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 FOXN3O00409 490 aaPredicted RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 MAN1A1P33908 653 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 RPL26P61254 145 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 PSMC5P62195 406 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 DOCK1Q14185 1865 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 HIC1Q14526 733 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 FAM91A1Q658Y4 838 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 KYAT3Q6YP21 454 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 CATSPERGQ6ZRH7 1159 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 MOB2Q70IA6 237 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 MORC4Q8TE76 937 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 HERPUD2Q9BSE4 406 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 STRA6Q9BX79 667 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 DCLK3Q9C098 648 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 PSMC3IPQ9P2W1 217 aaPredicted RBP14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 CEPT1Q9Y6K0 416 aa14.58□□□□□ -0.08
GTF3C1-203ENST00000562609 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 ADCY6O43306 1168 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CAPN15O75808 1086 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PIAS1O75925 651 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 TGDSO95455 350 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CCND2P30279 289 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CA8P35219 290 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 ACADVLP49748 655 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 BFSP1Q12934 665 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 VGLL4Q14135 290 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PRPF39Q86UA1 669 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 ZCCHC9Q8N567 271 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 POU5F2Q8N7G0 328 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 BBOF1Q8ND07 529 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PSPC1Q8WXF1 523 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 USP6NLQ92738 828 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CEP170P1Q96L14 293 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 TUBA8Q9NY65 449 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CROTQ9UKG9 612 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 TRIM17Q9Y577 477 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 RLFQ13129 1914 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 EMSYQ7Z589 1322 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 NAT1P18440 290 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 SP2Q02086 613 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PDIA2Q13087 525 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 SNAPC2Q13487 334 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 TGFBIQ15582 683 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 ANKDD1AQ495B1 522 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 EEPD1Q7L9B9 569 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 ERI1Q8IV48 349 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CCDC89Q8N998 374 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 ZNF564Q8TBZ8 553 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 NSUN6Q8TEA1 469 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PPP4R1Q8TF05 950 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 BSNDQ8WZ55 320 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CASP10Q92851 521 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CCDC127Q96BQ5 260 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 CNBD2Q96M20 576 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 NUP85Q9BW27 656 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 TEX13BQ9BXU2 312 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 RRN3Q9NYV6 651 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 INPP5FQ9Y2H2 1132 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 DTNAQ9Y4J8 743 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 PCDHA10Q9Y5I2 948 aa14.57□□□□□ -0.08
GTF3C1-203ENST00000562609 XPOTO43592 962 aaKnown RBP14.56□□□□□ -0.08
GTF3C1-203ENST00000562609 TNFAIP8O95379 198 aa14.56□□□□□ -0.08
GTF3C1-203ENST00000562609 BGNP21810 368 aa14.56□□□□□ -0.08
GTF3C1-203ENST00000562609 EPHB1P54762 984 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms