RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 IRF1P10914 325 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 RPS9P46781 194 aaKnown RBP20.37■□□□□ 0.85
TMEM249-202ENST00000562477 BCAT1P54687 386 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 MTAPQ13126 283 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 MAN2A1Q16706 1144 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 Q6ZS52 159 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 C11orf57Q6ZUT1 292 aaPredicted RBP20.37■□□□□ 0.85
TMEM249-202ENST00000562477 CCDC186Q7Z3E2 898 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 CPA6Q8N4T0 437 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 ATP2A3Q93084 1043 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 NACA2Q9H009 215 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 CHRDQ9H2X0 955 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 FBRSL1Q9HCM7 1045 aaKnown RBP20.37■□□□□ 0.85
TMEM249-202ENST00000562477 HESX1Q9UBX0 185 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 NAGPAQ9UK23 515 aa20.37■□□□□ 0.85
TMEM249-202ENST00000562477 AJAP1Q9UKB5 411 aaPredicted RBP20.37■□□□□ 0.85
TMEM249-202ENST00000562477 XPO1O14980 1071 aaKnown RBP20.36■□□□□ 0.85
TMEM249-202ENST00000562477 MBD3O95983 291 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 RARGP13631 454 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 KRT5P13647 590 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 GJA4P35212 333 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 BST2Q10589 180 aaKnown RBP20.36■□□□□ 0.85
TMEM249-202ENST00000562477 GAS6Q14393 721 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 EXOC3L4Q17RC7 722 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 PKDCCQ504Y2 493 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 RAB41Q5JT25 222 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 MIIPQ5JXC2 388 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 LCLAT1Q6UWP7 414 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 GBP6Q6ZN66 633 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 FAM114A1Q8IWE2 563 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 ULBP1Q9BZM6 244 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 UBXN6Q9BZV1 441 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 CYLDQ9NQC7 956 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.36■□□□□ 0.85
TMEM249-202ENST00000562477 NFE2L3Q9Y4A8 694 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 MYO15AQ9UKN7 3530 aa20.36■□□□□ 0.85
TMEM249-202ENST00000562477 ZFHX2Q9C0A1 2572 aaPredicted RBP20.35■□□□□ 0.85
TMEM249-202ENST00000562477 KCNJ18B7U540 433 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 PRKCSHP14314 528 aaPredicted RBP20.35■□□□□ 0.85
TMEM249-202ENST00000562477 PON1P27169 355 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 MAGEA9P43362 315 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 RGS7P49802 495 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 TKTL1P51854 596 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 KCNJ12Q14500 433 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 GAB4Q2WGN9 574 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 CCDC183Q5T5S1 534 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 FSTL4Q6MZW2 842 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 TUBGCP2Q9BSJ2 902 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 KLF16Q9BXK1 252 aaPredicted RBP20.35■□□□□ 0.85
TMEM249-202ENST00000562477 SIX2Q9NPC8 291 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 ACP6Q9NPH0 428 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 TMEM63CQ9P1W3 806 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 KIAA1257Q9ULG3 409 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.35■□□□□ 0.85
TMEM249-202ENST00000562477 CNTN6Q9UQ52 1028 aa20.35■□□□□ 0.85
TMEM249-202ENST00000562477 DMDP11532 3685 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 GTPBP10A4D1E9 387 aaKnown RBP20.34■□□□□ 0.85
TMEM249-202ENST00000562477 M0QYV0 167 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 LAMTOR5O43504 91 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 GABBR2O75899 941 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 CYP17A1P05093 508 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 SP9P0CG40 484 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 SLC8A3P57103 927 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 ADIGQ0VDE8 80 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 CCINQ13939 588 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 CNGA2Q16280 664 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 ARHGAP44Q17R89 818 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 VWA3BQ502W6 1294 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 C10orf120Q5SQS8 335 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 C1orf228Q6PIY5 440 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 TSSK4Q6SA08 328 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 BHLHA9Q7RTU4 235 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 DDX42Q86XP3 938 aaKnown RBP eCLIP20.34■□□□□ 0.85
TMEM249-202ENST00000562477 ENOX1Q8TC92 643 aaKnown RBP20.34■□□□□ 0.85
TMEM249-202ENST00000562477 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
TMEM249-202ENST00000562477 IRF2BPLQ9H1B7 796 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 NDST4Q9H3R1 872 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 C2orf42Q9NWW7 574 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 ATG2BQ96BY7 2078 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 MYOFQ9NZM1 2061 aa20.34■□□□□ 0.85
TMEM249-202ENST00000562477 RIF1Q5UIP0 2472 aaKnown RBP20.33■□□□□ 0.85
TMEM249-202ENST00000562477 GPR179Q6PRD1 2367 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 E2F8A0AVK6 867 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 BECN2A8MW95 431 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 PIK3R2O00459 728 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 TRDMT1O14717 391 aaKnown RBP20.33■□□□□ 0.85
TMEM249-202ENST00000562477 GREM1O60565 184 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 NFATC1O95644 943 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 EGFP01133 1207 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 SETSIPP0DME0 302 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 ATP5C1P36542 298 aaKnown RBP20.33■□□□□ 0.85
TMEM249-202ENST00000562477 PLA2G4AP47712 749 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 GALK1P51570 392 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 MFAP3P55082 362 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 CSTF1Q05048 431 aaKnown RBP20.33■□□□□ 0.85
TMEM249-202ENST00000562477 TMEM196Q5HYL7 178 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 CT47A1Q5JQC4 288 aaPredicted RBP20.33■□□□□ 0.85
TMEM249-202ENST00000562477 PMF1Q6P1K2 205 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 BBS7Q8IWZ6 715 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 LRRC4Q9HBW1 653 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms