RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SLC7A8Q9UHI5 535 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 TTLL3Q9Y4R7 772 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 PRR5-ARHGAP8B1AHC4 643 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 USP1O94782 785 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 ARL2P36404 184 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 RAP1GAPP47736 663 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 YWHAZP63104 245 aaKnown RBP14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 ARHGAP8P85298 464 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 NBPF20Q3BBV1 942 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 HSF5Q4G112 596 aaPredicted RBP14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 RASIP1Q5U651 963 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 ANGEL2Q5VTE6 544 aaKnown RBP14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 CMASQ8NFW8 434 aaPredicted RBP14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 FNIP1Q8TF40 1166 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 ECSITQ9BQ95 431 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 DHX33Q9H6R0 707 aaKnown RBP14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 PCMTD2Q9NV79 361 aa14.52□□□□□ -0.08
VPS9D1-202ENST00000561976 WDR81Q562E7 1941 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 ARHGAP42A6NI28 874 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 CHADO15335 359 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 KCNN4O15554 427 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 MED7O43513 233 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 ONECUT3O60422 494 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 TRUB2O95900 331 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 ACTR3P61158 418 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 IRX4P78413 519 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 MRPS5P82675 430 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 FKBP1CQ5VVH2 108 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 MTHFD1LQ6UB35 978 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 MYLK4Q86YV6 388 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 ZNF526Q8TF50 670 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 PLA2G4CQ9UP65 541 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 DOCK5Q9H7D0 1870 aa14.52□□□□□ -0.09
VPS9D1-202ENST00000561976 MEI4A8MW99 385 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 UGT1A9O60656 530 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ERBB2P04626 1255 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 KRT19P08727 400 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 OSBPP22059 807 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 UBAP2LQ14157 1087 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 NOMO1Q15155 1222 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ZCCHC23Q6ZST2 131 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 XYLT1Q86Y38 959 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 NDUFAF2Q8N183 169 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 FAM192AQ9GZU8 254 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 UGT1A7Q9HAW7 530 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 UGT1A10Q9HAW8 530 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 UGT1A8Q9HAW9 530 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 PNPLA8Q9NP80 782 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 KRT38O76015 456 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 APRTP07741 180 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 OSTNP61366 133 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 CAPSQ13938 189 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 MROH9Q5TGP6 573 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 CES4AQ5XG92 561 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 TUBGCP5Q96RT8 1024 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 GMLQ99445 158 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 TMEM134Q9H6X4 195 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ASNSD1Q9NWL6 643 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 DDX43Q9NXZ2 648 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 PAK5Q9P286 719 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 PPM1HQ9ULR3 514 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 PPME1Q9Y570 386 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 HEY1Q9Y5J3 304 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 MAD1L1Q9Y6D9 718 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ADCY3O60266 1144 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 TOM1L1O75674 476 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 RFPL1O75677 317 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 MAP3K6O95382 1288 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ITGBL1O95965 494 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ASPAP45381 313 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 STX3Q13277 289 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 CFAP157Q5JU67 520 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 DPH6Q7L8W6 267 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 EBF4Q9BQW3 602 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ADPGKQ9BRR6 497 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 CCDC106Q9BWC9 280 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 SMYD3Q9H7B4 428 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 SIRPGQ9P1W8 387 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 ZNF180Q9UJW8 692 aa14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 HBS1LQ9Y450 684 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-202ENST00000561976 KIAA1217Q5T5P2 1943 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 ATG7O95352 703 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 CDH8P55286 799 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 SP2Q02086 613 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 TFDP2Q14188 446 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 LRRC36Q1X8D7 754 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 FAM102AQ5T9C2 384 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 C20orf27Q9GZN8 174 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 LHX5Q9H2C1 402 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 RTN3O95197 1032 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 TNNC2P02585 160 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 CDC16Q13042 620 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 HIC1Q14526 733 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 KRT81Q14533 505 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 TBCCQ15814 346 aa14.5□□□□□ -0.09
VPS9D1-202ENST00000561976 CDO1Q16878 200 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms