RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TTC13Q8NBP0 860 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 USP33Q8TEY7 942 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 RANBP9Q96S59 729 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 TMEM39BQ9GZU3 492 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 INTS2Q9H0H0 1204 aaKnown RBP19.34■□□□□ 0.69
RAB40C-206ENST00000561781 GNPTGQ9UJJ9 305 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 ADCY7P51828 1080 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 PSMD6Q15008 389 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 AMIGO2Q86SJ2 522 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 ZCCHC9Q8N567 271 aaKnown RBP19.34■□□□□ 0.69
RAB40C-206ENST00000561781 TSPAN14Q8NG11 270 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 ZNF564Q8TBZ8 553 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-206ENST00000561781 TCP10LQ8TDR4 215 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 OLFM1Q99784 485 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 CTRCQ99895 268 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 REEP2Q9BRK0 252 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 MKNK1Q9BUB5 465 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 IKZF4Q9H2S9 585 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 PCDHGB4Q9UN71 923 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 PCDHGB5Q9Y5G0 923 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 N6AMT1Q9Y5N5 214 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 SCINQ9Y6U3 715 aa19.34■□□□□ 0.69
RAB40C-206ENST00000561781 MTA2O94776 668 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 CPOXP36551 454 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 NR1D2Q14995 579 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 EFTUD2Q15029 972 aaKnown RBP eCLIP19.33■□□□□ 0.69
RAB40C-206ENST00000561781 HP1BP3Q5SSJ5 553 aaPredicted RBP19.33■□□□□ 0.69
RAB40C-206ENST00000561781 C12orf60Q5U649 245 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 POTEGQ6S5H5 508 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 CAPN12Q6ZSI9 719 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 GET4Q7L5D6 327 aaPredicted RBP19.33■□□□□ 0.69
RAB40C-206ENST00000561781 CCDC89Q8N998 374 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 SLC44A5Q8NCS7 719 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 HERPUD2Q9BSE4 406 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 NUP85Q9BW27 656 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.69
RAB40C-206ENST00000561781 DCLK3Q9C098 648 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 C12orf65Q9H3J6 166 aaKnown RBP19.33■□□□□ 0.69
RAB40C-206ENST00000561781 SAYSD1Q9NPB0 183 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 VPS45Q9NRW7 570 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.33■□□□□ 0.69
RAB40C-206ENST00000561781 FAM198AQ9UFP1 575 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 PCDHB2Q9Y5E7 798 aa19.33■□□□□ 0.69
RAB40C-206ENST00000561781 DYTNA2CJ06 578 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 ZNF701M0R085 212 aaPredicted RBP19.33■□□□□ 0.68
RAB40C-206ENST00000561781 SPDYE2Q495Y8 402 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 FAM209AQ5JX71 171 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 RARS2Q5T160 578 aaKnown RBP19.33■□□□□ 0.68
RAB40C-206ENST00000561781 TMEM126BQ8IUX1 230 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 EXOC8Q8IYI6 725 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 USP6NLQ92738 828 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 NLRP4Q96MN2 994 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 WWP1Q9H0M0 922 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 BCAS3Q9H6U6 928 aa19.33■□□□□ 0.68
RAB40C-206ENST00000561781 ALG13Q9NP73 1137 aaKnown RBP19.33■□□□□ 0.68
RAB40C-206ENST00000561781 FAM237BA0A1B0GVD1 139 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 AQP9O43315 295 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 CLASP2O75122 1294 aaKnown RBP19.32■□□□□ 0.68
RAB40C-206ENST00000561781 MED24O75448 989 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 ATP1A4Q13733 1029 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 ITPRIPL1Q6GPH6 555 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 C14orf80Q86SX3 495 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 PTCD2Q8WV60 388 aaKnown RBP19.32■□□□□ 0.68
RAB40C-206ENST00000561781 SLC5A5Q92911 643 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 OTUD5Q96G74 571 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 CCDC138Q96M89 665 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 OLFML3Q9NRN5 406 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 RABGEF1Q9UJ41 708 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 SCN4AP35499 1836 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 POLR2AP24928 1970 aaKnown RBP19.32■□□□□ 0.68
RAB40C-206ENST00000561781 SULT1C4O75897 302 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 GCNT3O95395 438 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 LDHCP07864 332 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 OASLQ15646 514 aaKnown RBP19.32■□□□□ 0.68
RAB40C-206ENST00000561781 MDH1BQ5I0G3 518 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 FAM118BQ9BPY3 351 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 CCDC106Q9BWC9 280 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 MAN1C1Q9NR34 630 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 CDH7Q9ULB5 785 aa19.32■□□□□ 0.68
RAB40C-206ENST00000561781 TPPPO94811 219 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 TRIM49P0CI25 452 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 TRIM49CP0CI26 452 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 PSMC2P35998 433 aaKnown RBP19.31■□□□□ 0.68
RAB40C-206ENST00000561781 FASTKD3Q14CZ7 662 aaKnown RBP19.31■□□□□ 0.68
RAB40C-206ENST00000561781 UBE2SQ16763 222 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 RGS21Q2M5E4 152 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 ZNF394Q53GI3 561 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 ZNF444Q8N0Y2 327 aaPredicted RBP19.31■□□□□ 0.68
RAB40C-206ENST00000561781 PQLC1Q8N2U9 271 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 MTMR14Q8NCE2 650 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 RUSC1Q9BVN2 902 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 SMYD3Q9H7B4 428 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 KLHL3Q9UH77 587 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 SIN3BO75182 1162 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 TRPA1O75762 1119 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 PSMC6P62333 389 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 CNTNAP1P78357 1384 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 E2F2Q14209 437 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 BMT2Q1RMZ1 405 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms