RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ALG6Q9Y672 507 aa7.55□□□□□ -1.2
CDH1-203ENST00000561751 ROBO3Q96MS0 1386 aa7.55□□□□□ -1.2
CDH1-203ENST00000561751 LOC105371267A0A1B0GV96 52 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 FAM172BPA6NC97 362 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ZNF839A8K0R7 811 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 FAM155AB1AL88 458 aaPredicted RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 EML1O00423 815 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 ATP2A1O14983 1001 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ACOX3O15254 700 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 SLC16A3O15427 465 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 GRIN3BO60391 1043 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 LGR5O75473 907 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 UFL1O94874 794 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 H6PDO95479 791 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ACSL3O95573 720 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 OR52Z1P0C646 297 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 FCER1AP12319 257 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 GZMAP12544 262 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ATF2P15336 505 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PLCG1P19174 1290 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 CA8P35219 290 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 CPOXP36551 454 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ZAP70P43403 619 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 RXRGP48443 463 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 CCR3P51677 355 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 BASP1P80723 227 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 MYBPC1Q00872 1141 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 TFAP4Q01664 338 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 DMPKQ09013 629 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 TROAPQ12815 778 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH1-203ENST00000561751 KCNJ8Q15842 424 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 EXOC3L4Q17RC7 722 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 LSM12Q3MHD2 195 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 EFHC2Q5JST6 749 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 SLC27A3Q5K4L6 730 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 HP1BP3Q5SSJ5 553 aaPredicted RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 CYP4A22Q5TCH4 519 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 NDUFAF5Q5TEU4 345 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 BTBD8Q5XKL5 378 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 ATG16L1Q676U5 607 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 SLC30A10Q6XR72 485 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PIK3AP1Q6ZUJ8 805 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 COPS6Q7L5N1 327 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 KRT25Q7Z3Z0 450 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 MCF2L2Q86YR7 1114 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PQLC1Q8N2U9 271 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 STON2Q8WXE9 905 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 CD101Q93033 1021 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 DHRS4Q9BTZ2 278 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 MYL10Q9BUA6 226 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 CCDC106Q9BWC9 280 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 OSBPL11Q9BXB4 747 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 TMEM120AQ9BXJ8 343 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 RAB34Q9BZG1 259 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 GRIP2Q9C0E4 1043 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PAIP1Q9H074 479 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 EHD1Q9H4M9 534 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 DHX33Q9H6R0 707 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 SLCO1B3Q9NPD5 702 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 C8orf4Q9NR00 106 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PNPLA3Q9NST1 481 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 RIC8BQ9NVN3 520 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 ZMAT5Q9UDW3 170 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 APPL1Q9UKG1 709 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 PRPF19Q9UMS4 504 aaKnown RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 TJP1Q07157 1748 aa7.54□□□□□ -1.2
CDH1-203ENST00000561751 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
CDH1-203ENST00000561751 UBE4BO95155 1302 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 GOLGA8QA0A0J9YX86 632 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 CCDC194A0A1B0GVG4 234 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 EXOC1LA0A1B0GW35 172 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 GOLGA8OA6NCC3 632 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 GOLGA8NF8WBI6 632 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 UBE2Q2LH0YL09 131 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 H3BNH8 94 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 GOLGA8RI6L899 631 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 K7EPI3 171 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 TRAF5O00463 557 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 KCNQ3O43525 872 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 ZBTB11O95625 1053 aaPredicted RBP7.53□□□□□ -1.2
CDH1-203ENST00000561751 CRTAMO95727 393 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 ANXA1P04083 346 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 RBP3P10745 1247 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 CHRNB1P11230 501 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 UBL4AP11441 157 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 RPL17P18621 184 aaKnown RBP7.53□□□□□ -1.2
CDH1-203ENST00000561751 JAK1P23458 1154 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 HMGB2P26583 209 aaKnown RBP7.53□□□□□ -1.2
CDH1-203ENST00000561751 PON1P27169 355 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 DCKP27707 260 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 HOXD13P35453 343 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 NUDT1P36639 197 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 MAGEA4P43358 317 aa7.53□□□□□ -1.2
CDH1-203ENST00000561751 STAT2P52630 851 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms