RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 C2orf78A6NCI8 922 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 DPYSL4O14531 572 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 ECI2O75521 394 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 OAS1P00973 400 aaKnown RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 SERPING1P05155 500 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 HNRNPH3P31942 346 aaKnown RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 ATP5C1P36542 298 aaKnown RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 DAOAP59103 153 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 YWHAGP61981 247 aaKnown RBP eCLIP17.18■□□□□ 0.34
USB1-204ENST00000561568 BTBD8Q5XKL5 378 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 PPP1R2P3Q6NXS1 205 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 KLHDC10Q6PID8 442 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 TMC6Q7Z403 805 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 SCD5Q86SK9 330 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 ZDHHC17Q8IUH5 632 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 ARL14EPQ8N8R7 260 aaPredicted RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 C1orf131Q8NDD1 294 aaKnown RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 IPO4Q8TEX9 1081 aaKnown RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 C18orf8Q96DM3 657 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 CPXM1Q96SM3 734 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 UHRF1Q96T88 793 aaPredicted RBP17.18■□□□□ 0.34
USB1-204ENST00000561568 TRIM62Q9BVG3 475 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 RNF38Q9H0F5 515 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 KCNK12Q9HB15 430 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 ABCC13Q9NSE7 274 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 TDP1Q9NUW8 608 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 OBP2AQ9NY56 170 aa17.18■□□□□ 0.34
USB1-204ENST00000561568 XIRP2A4UGR9 3374 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 AKR1B15C9JRZ8 316 aaPredicted RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 E5RJQ4 531 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 PIK3R2O00459 728 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 CKMP06732 381 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 UNGP13051 313 aaPredicted RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 RARGP13631 454 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 GABRB2P47870 512 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 NOMO3P69849 1222 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 SLC7A9P82251 487 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 TBX2Q13207 712 aaPredicted RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 ZNF268Q14587 947 aaPredicted RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 EFHC1Q5JVL4 640 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 BSPRYQ5W0U4 402 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 PARM1Q6UWI2 310 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 VPS36Q86VN1 386 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 GPIHBP1Q8IV16 184 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 CNGA4Q8IV77 575 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 CPA5Q8WXQ8 436 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 NACA2Q9H009 215 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 KIF9Q9HAQ2 790 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 NMUR1Q9HB89 426 aa17.17■□□□□ 0.34
USB1-204ENST00000561568 OLA1Q9NTK5 396 aaKnown RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 SEPT11Q9NVA2 429 aaKnown RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.17■□□□□ 0.34
USB1-204ENST00000561568 TCF20Q9UGU0 1960 aaKnown RBP17.17■□□□□ 0.34
USB1-204ENST00000561568 YJEFN3A6XGL0 299 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 E7ENQ6 273 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 PAPSS1O43252 624 aaPredicted RBP17.16■□□□□ 0.34
USB1-204ENST00000561568 COCHO43405 550 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 TLR5O60602 858 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 OLFM2O95897 454 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 GLI1P08151 1106 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 SKILP12757 684 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 NSFP46459 744 aaKnown RBP17.16■□□□□ 0.34
USB1-204ENST00000561568 PGFP49763 221 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 HTR4Q13639 388 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 CLEC16AQ2KHT3 1053 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 NAA35Q5VZE5 725 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 TANGO2Q6ICL3 276 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 BEND5Q7L4P6 421 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 RNF135Q8IUD6 432 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 SLC44A3Q8N4M1 653 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 RNF139Q8WU17 664 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 NDRG1Q92597 394 aaKnown RBP17.16■□□□□ 0.34
USB1-204ENST00000561568 FGF14Q92915 247 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 PCDHB18PQ96TA0 734 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 DNAJC7Q99615 494 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 SYT11Q9BT88 431 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 CCSER2Q9H7U1 834 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 OSER1Q9NX31 292 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 DNMT3LQ9UJW3 386 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 NUMBLQ9Y6R0 609 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
USB1-204ENST00000561568 ZNF638Q14966 1978 aaKnown RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 ADCY5O95622 1261 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 LTFP02788 710 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 MBL2P11226 248 aaPredicted RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 GZMAP12544 262 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 MMP8P22894 467 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 VIPR2P41587 438 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 SLC6A3Q01959 620 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 TDGQ13569 410 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 PTPN20Q4JDL3 420 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 C10orf120Q5SQS8 335 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 E4F1Q66K89 784 aaPredicted RBP17.15■□□□□ 0.34
USB1-204ENST00000561568 HGSNATQ68CP4 663 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 OR6B2Q6IFH4 312 aa17.15■□□□□ 0.34
USB1-204ENST00000561568 ACAD10Q6JQN1 1059 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms