RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TMEM9BQ9NQ34 198 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 CFAP97Q9P2B7 532 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 HCN2Q9UL51 889 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 KIAA1549LQ6ZVL6 1849 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 PVALEFA0A1B0GWK0 134 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 KHNYNO15037 678 aaKnown RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 CUTAO60888 179 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 KLF8O95600 359 aaPredicted RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 APODP05090 189 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 DLATP10515 647 aaKnown RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 TNNI1P19237 187 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 GBP1P32455 592 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SLC6A11P48066 632 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 NOVA1P51513 510 aaKnown RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 AP3M2P53677 418 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SLC5A3P53794 718 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SEC13P55735 322 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 MYL6P60660 151 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 ASIC1P78348 528 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 GABPB1Q06547 395 aaPredicted RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 ZNF252P-AS1Q0IIN9 211 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 STK38Q15208 465 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SKOR2Q2VWA4 1001 aaPredicted RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 LY6G5CQ5SRR4 150 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SASS6Q6UVJ0 657 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 HS2ST1Q7LGA3 356 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 PIP4P1Q86T03 277 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SYT12Q8IV01 421 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SLC9A9Q8IVB4 645 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 FUKQ8N0W3 1084 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 NUP93Q8N1F7 819 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 IQUBQ8NA54 791 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 TXNDC5Q8NBS9 432 aaKnown RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 ZMIZ2Q8NF64 920 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 OR6B3Q8NGW1 331 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 GOLGA5Q8TBA6 731 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 PARD3BQ8TEW8 1205 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 GATA6Q92908 595 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 MS4A3Q96HJ5 214 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SMYD3Q9H7B4 428 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 CSNK1G1Q9HCP0 422 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 DMAP1Q9NPF5 467 aaPredicted RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 ARHGEF4Q9NR80 690 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 RYDENQ9NUL5 291 aaKnown RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 DMAC2Q9NW81 257 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 SMPD4Q9NXE4 827 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 FAM13BQ9NYF5 915 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 MBD1Q9UIS9 605 aaPredicted RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 STARD13Q9Y3M8 1113 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 EML5Q05BV3 1969 aa8.91□□□□□ -0.98
PALB2-202ENST00000561514 FASNP49327 2511 aaKnown RBP8.91□□□□□ -0.98
PALB2-202ENST00000561514 SPEGQ15772 3267 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 PTPRDP23468 1912 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 ANAPC1Q9H1A4 1944 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 ATP8B3O60423 1300 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 TMEM8BA6NDV4 472 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 A8MXQ7 604 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 PATE3B3GLJ2 98 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 CLDN5O00501 218 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 GIPC1O14908 333 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 VNN1O95497 513 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 MBL2P11226 248 aaPredicted RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 PTGER3P43115 390 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 CYP2J2P51589 502 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 IRX4P78413 519 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 GAD2Q05329 585 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 LMAN2Q12907 356 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 BYSLQ13895 437 aaKnown RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 KNOP1Q1ED39 458 aaKnown RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 HECTD3Q5T447 861 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 SH3PXD2AQ5TCZ1 1133 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 SLC23A3Q6PIS1 610 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 UNQ6494/PRO21346Q6UXR6 183 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 HTR3DQ70Z44 454 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 LPCAT2Q7L5N7 544 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 TRMT11Q7Z4G4 463 aaKnown RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 CNPY4Q8N129 248 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 CRYBG2Q8N1P7 616 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 CCDC33Q8N5R6 958 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 TERB1Q8NA31 727 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 NOC3LQ8WTT2 800 aaKnown RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 FBXO32Q969P5 355 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 CCDC127Q96BQ5 260 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 DHX58Q96C10 678 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 SMARCD1Q96GM5 515 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 TNIP3Q96KP6 325 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 SPACA7Q96KW9 195 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 KCNK16Q96T55 309 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 GABRG3Q99928 467 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 SDCBP2Q9H190 292 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 CAPN10Q9HC96 672 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 POLMQ9NP87 494 aaPredicted RBP8.9□□□□□ -0.98
PALB2-202ENST00000561514 CYLDQ9NQC7 956 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 SPHK2Q9NRA0 654 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 PILRBQ9UKJ0 227 aa8.9□□□□□ -0.98
PALB2-202ENST00000561514 INVSQ9Y283 1065 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms