RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CCDC163A0A0D9SF12 145 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 C2orf78A6NCI8 922 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 ZNF840PA6NDX5 716 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 CHURC1-FNTBB4DL54 471 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 F8VP50 259 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 AKAP3O75969 853 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 USP17L7P0C7H9 530 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 TGM1P22735 817 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 BDNFP23560 247 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 NR2F2P24468 414 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 PDE6CP51160 858 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 ETF1P62495 437 aaKnown RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 SATB1Q01826 763 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 LRMPQ12912 555 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 RUNX3Q13761 415 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 PDGFRLQ15198 375 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 ZNF667Q5HYK9 610 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 MDH1BQ5I0G3 518 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 FSTL4Q6MZW2 842 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 INTS8Q75QN2 995 aaKnown RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 VSTM4Q8IW00 320 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 YAF2Q8IY57 180 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 ADSSL1Q8N142 457 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 CRYBG2Q8N1P7 616 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 AOPEPQ8N6M6 819 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 OSCP1Q8WVF1 389 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 SMARCD1Q96GM5 515 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 C16orf45Q96MC5 204 aaPredicted RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 PNPLA8Q9NP80 782 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 DMAP1Q9NPF5 467 aaPredicted RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 EHD2Q9NZN4 543 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 HMGXB4Q9UGU5 601 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 SMG5Q9UPR3 1016 aaKnown RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 ADAMTS9Q9P2N4 1935 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 FRYLO94915 3013 aa7.3□□□□□ -1.24
SPG11-224ENST00000561268 CNOT1A5YKK6 2376 aaKnown RBP7.3□□□□□ -1.24
SPG11-224ENST00000561268 ATP8B3O60423 1300 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 EFCAB8A8MWE9 144 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 HHLA1C9JL84 531 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 DPYSL4O14531 572 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 CALUO43852 315 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 CILPO75339 1184 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 RTN3O95197 1032 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 HLA-DRAP01903 254 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 CKMP06732 381 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 ARSAP15289 507 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 H2AFXP16104 143 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 ZNF18P17022 549 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 FECHP22830 423 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 GTF2H1P32780 548 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 GJA4P35212 333 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 GNL1P36915 607 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 EIF2DP41214 584 aaKnown RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 RAP1GAPP47736 663 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 VAMP7P51809 220 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 CDR1P51861 262 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 KPNA1P52294 538 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 SLC5A3P53794 718 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 FANCCQ00597 558 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 PPP3CAQ08209 521 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 TBX2Q13207 712 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 TRPC3Q13507 836 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 PON2Q15165 354 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 TAF12Q16514 161 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 DPCR1Q3MIW9 517 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 TRIM68Q6AZZ1 485 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 FILIP1Q7Z7B0 1213 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 SCN4BQ8IWT1 228 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 ARL14EPQ8N8R7 260 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 PDZD8Q8NEN9 1154 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 OR6B3Q8NGW1 331 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 SH3RF2Q8TEC5 729 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 WHAMMQ8TF30 809 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 RUBCNQ92622 972 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 ATP2A3Q93084 1043 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 TNIP3Q96KP6 325 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 GSDMAQ96QA5 445 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 TWNKQ96RR1 684 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 MMS19Q96T76 1030 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 XPO4Q9C0E2 1151 aaKnown RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 NIF3L1Q9GZT8 377 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 SNX25Q9H3E2 840 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 EBF3Q9H4W6 596 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 ECT2Q9H8V3 914 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 LMAN1LQ9HAT1 526 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 CYP3A43Q9HB55 503 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 APOBEC3GQ9HC16 384 aaKnown RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 TMEM8AQ9HCN3 771 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 GKN1Q9NS71 199 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 KRT82Q9NSB4 513 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 RBM12Q9NTZ6 932 aaKnown RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 C2orf42Q9NWW7 574 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 THG1LQ9NWX6 298 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms