RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GCOM1H8Y6P7 765 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 ACOT7O00154 380 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 RNF103O00237 685 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 NFIBO00712 420 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CTDSP2O14595 271 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 GRM6O15303 877 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 BCAT2O15382 392 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 DHX15O43143 795 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 DYNC1LI2O43237 492 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 CCP110O43303 1012 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 HNRNPRO43390 633 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 SYNCRIPO60506 623 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 TSC22D2O75157 780 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 GJB3O75712 270 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SEC14L2O76054 403 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 REC8O95072 547 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PDE8BO95263 885 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ZBTB7AO95365 584 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MATN4O95460 622 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 NTSR2O95665 410 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MLYCDO95822 493 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FTCDO95954 541 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 GASTP01350 101 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FYNP06241 537 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PDHA1P08559 390 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SNRNP70P08621 437 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3HP0C7X1 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SRFP11831 508 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ALAS1P13196 640 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 IL1R1P14778 569 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 GYPEP15421 78 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 IFNAR1P17181 557 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PRKCAP17252 672 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ATP5JP18859 108 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MCM3P25205 808 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 KLRK1P26718 216 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 MAPK4P31152 587 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PRKAR1BP31321 381 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CRHR1P34998 444 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SREBF1P36956 1147 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 KIR2DL1P43626 348 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 KIR2DL2P43627 348 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 NRIP1P48552 1158 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CCT4P50991 539 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 STAT2P52630 851 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ZNF135P52742 658 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 LIMK1P53667 647 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SEC24CP53992 1094 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CDH8P55286 799 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 EIF4A1P60842 406 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 NKX3-2P78367 333 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CYP4F8P98187 520 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DUSP2Q05923 314 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CD69Q07108 199 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TEFQ10587 303 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 RALGDSQ12967 914 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TMED1Q13445 227 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TNFAIP1Q13829 316 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PTK6Q13882 451 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 CBFBQ13951 182 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PPA1Q15181 289 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ADIPOQQ15848 244 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PKN2Q16513 984 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 MST1LQ2TV78 715 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ANKDD1AQ495B1 522 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PLA1AQ53H76 456 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 C19orf54Q5BKX5 351 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TOR1AIP1Q5JTV8 583 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DNTTIP2Q5QJE6 756 aaKnown RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 GARNL3Q5VVW2 1013 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3GQ6DHY5 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 GRAMD4Q6IC98 578 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DGAT2L7PQ6IED9 249 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ETFRF1Q6IPR1 90 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3CQ6IPX1 549 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 GALNT17Q6IS24 598 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 HMBOX1Q6NT76 420 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 OGFOD3Q6PK18 319 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FAM111BQ6SJ93 734 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SARM1Q6SZW1 724 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 KDELC1Q6UW63 502 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ABHD15Q6UXT9 468 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 BEND4Q6ZU67 534 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 H1FNTQ75WM6 255 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 ZNF804AQ7Z570 1209 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 USP37Q86T82 979 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 FAM90A1Q86YD7 464 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TICAM1Q8IUC6 712 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 SPPL2CQ8IUH8 684 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 LYSMD2Q8IV50 215 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TUSC5Q8IXB3 177 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 KLHL7Q8IXQ5 586 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 PEX5LQ8IYB4 626 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ADGRF2Q8IZF7 708 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D3Q8IZP1 549 aaPredicted RBP2.18□□□□□ -2.06
RTF1-207ENST00000561076 SIX6OS1Q8N1H7 587 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 ZNF619Q8N2I2 560 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 WDTC1Q8N5D0 677 aa2.18□□□□□ -2.06
RTF1-207ENST00000561076 DPP10Q8N608 796 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms