RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 HDCP19113 662 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SP100P23497 879 aaPredicted RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 HNRNPH3P31942 346 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 AVPR1AP37288 418 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 GABRB2P47870 512 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 PGFP49763 221 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SNX16P57768 344 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 FMO1Q01740 532 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 ADIGQ0VDE8 80 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 TDGQ13569 410 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 TRIM14Q14142 442 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 PTPN21Q16825 1174 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SPECC1LQ69YQ0 1117 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 TANGO2Q6ICL3 276 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 TRIM72Q6ZMU5 477 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 VSTM4Q8IW00 320 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 MFSD6LQ8IWD5 586 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 CELF5Q8N6W0 485 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 TMEM35BQ8NCS4 154 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 DEPDC1BQ8WUY9 529 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 CYP2S1Q96SQ9 504 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 RPP25Q9BUL9 199 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SLITRK6Q9H5Y7 841 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 NMUR1Q9HB89 426 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SLC2A4RGQ9NR83 387 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 OSER1Q9NX31 292 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 GMIPQ9P107 970 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 ARHGAP26Q9UNA1 814 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 NUMBLQ9Y6R0 609 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 A0A1W2PQH9 124 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 YJEFN3A6XGL0 299 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 E7ENQ6 273 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 TLR5O60602 858 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 PRAMEF12O95522 483 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 GLI1P08151 1106 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 RALAP11233 206 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 UNGP13051 313 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 PSMC3P17980 439 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 RGS7P49802 495 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 YWHAGP61981 247 aaKnown RBP eCLIP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 NOMO3P69849 1222 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 FCHO2Q0JRZ9 810 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 IFRD2Q12894 506 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 TBX2Q13207 712 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 PDCLQ13371 301 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 SFMBT2Q5VUG0 894 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 BSPRYQ5W0U4 402 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 VITQ6UXI7 678 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 TADA2BQ86TJ2 420 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 ZDHHC17Q8IUH5 632 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 DRC7Q8IY82 874 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 UBALD2Q8IYN6 164 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 SIX6OS1Q8N1H7 587 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 ARL14EPQ8N8R7 260 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 ZNF397Q8NF99 534 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 OLIG1Q8TAK6 271 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 SLC20A1Q8WUM9 679 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 RSAD2Q8WXG1 361 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 USP13Q92995 863 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 RSPRY1Q96DX4 576 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 PPP1R13BQ96KQ4 1090 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 LRRC3BQ96PB8 259 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 NOX5Q96PH1 765 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 CPXM1Q96SM3 734 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 PLA2G2FQ9BZM2 168 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 TRIM5Q9C035 493 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 TRPV5Q9NQA5 729 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 ABCC13Q9NSE7 274 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 ASNSD1Q9NWL6 643 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 DUSP12Q9UNI6 340 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 LUC7L2Q9Y383 392 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 BZW2Q9Y6E2 419 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 DOCK4Q8N1I0 1966 aa10.11□□□□□ -0.79
RABGGTA-221ENST00000561055 F5P12259 2224 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 KIAA1549LQ6ZVL6 1849 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 HEPACAM2A8MVW5 462 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 E5RJQ4 531 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 PI4K2BG5E9Z4 385 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 CHADO15335 359 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 PAPSS1O43252 624 aaPredicted RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 COCHO43405 550 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 FYNP06241 537 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 CKMP06732 381 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 ASGR2P07307 311 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 RARGP13631 454 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 LCP1P13796 627 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 SCNN1AP37088 669 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 VIPR2P41587 438 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 MLLT6P55198 1093 aaPredicted RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 GSCP56915 257 aaPredicted RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 ZXDBP98169 803 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 CENPCQ03188 943 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms