RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 EPSTI1Q96J88 318 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 PCIF1Q9H4Z3 704 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 CCDC86Q9H6F5 360 aaKnown RBP19.71■□□□□ 0.75
TPM1-226ENST00000560959 TBC1D7Q9P0N9 293 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 KIAA1522Q9P206 1035 aaPredicted RBP19.71■□□□□ 0.75
TPM1-226ENST00000560959 HCN2Q9UL51 889 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 SH3BP1Q9Y3L3 701 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 NFE2L3Q9Y4A8 694 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 SCAMP3O14828 347 aaKnown RBP19.7■□□□□ 0.74
TPM1-226ENST00000560959 COCHO43405 550 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 FTH1P19P0C7X4 201 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 GNSP15586 552 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 C10orf76Q5T2E6 689 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 HECTD3Q5T447 861 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 WDR49Q8IV35 697 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 NAT16Q8N8M0 369 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 HSPA12BQ96MM6 686 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 GABRG3Q99928 467 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 KIAA1586Q9HCI6 787 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 COMMD8Q9NX08 183 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 IL37Q9NZH6 218 aa19.7■□□□□ 0.74
TPM1-226ENST00000560959 APOBEC2Q9Y235 224 aaKnown RBP19.7■□□□□ 0.74
TPM1-226ENST00000560959 ADAMTS20P59510 1910 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 GFRA2O00451 464 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 PLEKHG6Q3KR16 790 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 WDR45BQ5MNZ6 344 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 RRAGBQ5VZM2 374 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 USP49Q70CQ1 688 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 TRAPPC11Q7Z392 1133 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 TMEM25Q86YD3 366 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 NAXDQ8IW45 347 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 OR2I1PQ8NGU4 316 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 IPO4Q8TEX9 1081 aaKnown RBP19.69■□□□□ 0.74
TPM1-226ENST00000560959 FBXO32Q969P5 355 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 CAMK1GQ96NX5 476 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 MRPL45Q9BRJ2 306 aaKnown RBP19.69■□□□□ 0.74
TPM1-226ENST00000560959 TMEM30AQ9NV96 361 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 PTPRJQ12913 1337 aa19.69■□□□□ 0.74
TPM1-226ENST00000560959 MYO18AQ92614 2054 aaKnown RBP19.69■□□□□ 0.74
TPM1-226ENST00000560959 FAM92AA1XBS5 289 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 PRPF6O94906 941 aaKnown RBP19.68■□□□□ 0.74
TPM1-226ENST00000560959 ZDHHC11BP0C7U3 371 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 NDUFV2P19404 249 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 CACNA2D1P54289 1103 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 ANO4Q32M45 955 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 C19orf48Q6RUI8 117 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 METTL3Q86U44 580 aaKnown RBP19.68■□□□□ 0.74
TPM1-226ENST00000560959 MIB1Q86YT6 1006 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 BBS7Q8IWZ6 715 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 OR6B3Q8NGW1 331 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 NOC3LQ8WTT2 800 aaKnown RBP19.68■□□□□ 0.74
TPM1-226ENST00000560959 SCUBE2Q9NQ36 999 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 DKK4Q9UBT3 224 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 CHORDC1Q9UHD1 332 aaPredicted RBP19.68■□□□□ 0.74
TPM1-226ENST00000560959 CYP8B1Q9UNU6 501 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 NME7Q9Y5B8 376 aa19.68■□□□□ 0.74
TPM1-226ENST00000560959 CBFA2T3O75081 653 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 NDUFS2O75306 463 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 STAU1O95793 577 aaKnown RBP19.67■□□□□ 0.74
TPM1-226ENST00000560959 CST3P01034 146 aaPredicted RBP19.67■□□□□ 0.74
TPM1-226ENST00000560959 IDEP14735 1019 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 COL28A1Q2UY09 1125 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 LARP1BQ659C4 914 aaKnown RBP19.67■□□□□ 0.74
TPM1-226ENST00000560959 GRAMD4Q6IC98 578 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 TOGARAM2Q6ZUX3 1019 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 HTR3DQ70Z44 454 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 CHPFQ8IZ52 775 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 RGL4Q8IZJ4 473 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 DNASE2BQ8WZ79 361 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 TMX3Q96JJ7 454 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 XPO6Q96QU8 1125 aaKnown RBP19.67■□□□□ 0.74
TPM1-226ENST00000560959 B3GNT5Q9BYG0 378 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 ZNF518BQ9C0D4 1074 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 PANK4Q9NVE7 773 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 WDR35Q9P2L0 1181 aa19.67■□□□□ 0.74
TPM1-226ENST00000560959 MYOFQ9NZM1 2061 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 CACNG3O60359 315 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 ZNF883P0CG24 379 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 TXLNAP40222 546 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 RABEP1Q15276 862 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 EGFLAMQ63HQ2 1017 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 STXBP4Q6ZWJ1 553 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 CBWD2Q8IUF1 395 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 B3GALNT2Q8NCR0 500 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 MRGPRX1Q96LB2 322 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 FGFBP2Q9BYJ0 223 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 MARK1Q9P0L2 795 aa19.66■□□□□ 0.74
TPM1-226ENST00000560959 SRPRBQ9Y5M8 271 aaKnown RBP19.66■□□□□ 0.74
TPM1-226ENST00000560959 ADAMTS9Q9P2N4 1935 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 A0A1B0GTW7 788 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 A8MXQ7 604 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 WASP42768 502 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 ZNF132P52740 706 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 TNNC1P63316 161 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 IFRD2Q12894 506 aaPredicted RBP19.65■□□□□ 0.74
TPM1-226ENST00000560959 WDR72Q3MJ13 1102 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 CCDC73Q6ZRK6 1079 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 PNPLA1Q8N8W4 532 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 CADM4Q8NFZ8 388 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 SCFD1Q8WVM8 642 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms