RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 AGFG1P52594 562 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ARL4CP56559 192 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CDK17Q00537 523 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PTPAQ15257 358 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 C3orf38Q5JPI3 329 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC35F1Q5T1Q4 408 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RAB12Q6IQ22 244 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 MTFR2Q6P444 385 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC62Q6P9F0 684 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HOOK3Q86VS8 718 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ENDOVQ8N8Q3 282 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 EIF1ADQ8N9N8 165 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 WDR60Q8WVS4 1066 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 BHMTQ93088 406 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF274Q96GC6 653 aaPredicted RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 UROC1Q96N76 676 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 SPATA16Q9BXB7 569 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PUS3Q9BZE2 481 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 PNPLA8Q9NP80 782 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 RBM12Q9NTZ6 932 aaKnown RBP7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 CYP39A1Q9NYL5 469 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 HYOU1Q9Y4L1 999 aa7.06□□□□□ -1.28
TSPAN3-209ENST00000560715 TMEM247A6NEH6 219 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 POTEMA6NI47 508 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 KIF28PB7ZC32 967 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 CETN3O15182 167 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 ATXN7O15265 892 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 ASNA1O43681 348 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MAFO75444 373 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 KRT38O76015 456 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 AOAHP28039 575 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MLH1P40692 756 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 CD97P48960 835 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MAGOHP61326 146 aaKnown RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 KLHL30Q0D2K2 578 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC12A1Q13621 1099 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 WSCD2Q2TBF2 565 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 P3H1Q32P28 736 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 RABL6Q3YEC7 729 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 PPM1JQ5JR12 505 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 TBC1D9BQ66K14 1250 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 POTEGQ6S5H5 508 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 OR8H3Q8N146 312 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 CASKIN2Q8WXE0 1202 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 HERVK_113Q902F9 699 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 KRT35Q92764 455 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MAGOHBQ96A72 148 aaKnown RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 CLMNQ96JQ2 1002 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 COG8Q96MW5 612 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 RAB3IPQ96QF0 476 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 SMC6Q96SB8 1091 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC28BQ9BUN5 200 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 DDX23Q9BUQ8 820 aaKnown RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MIS12Q9H081 205 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 KIAA1683Q9H0B3 1180 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 TTYH1Q9H313 450 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 IGSF9Q9P2J2 1179 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 HSFX1Q9UBD0 423 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 LNPEPQ9UIQ6 1025 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 PIAS3Q9Y6X2 628 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 LRP6O75581 1613 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 TJP1Q07157 1748 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MAGEA13PA6NCF6 341 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 DVL2O14641 736 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 COBLO75128 1261 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 PEX11AO75192 247 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 ALAS2P22557 587 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 EEF1GP26641 437 aaKnown RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 ABCD3P28288 659 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 TRPC3Q13507 836 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 POLD3Q15054 466 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 BBS9Q3SYG4 887 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF783Q6ZMS7 281 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 RAPH1Q70E73 1250 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 R3HCC1LQ7Z5L2 792 aaKnown RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 TTC7BQ86TV6 843 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 GSDMBQ8TAX9 411 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 SPATA20Q8TB22 786 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 LRRC45Q96CN5 670 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 POLR3CQ9BUI4 534 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 TUBA8Q9NY65 449 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 LIMA1Q9UHB6 759 aaKnown RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 CHMP2BQ9UQN3 213 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MAN2B2Q9Y2E5 1009 aa7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MTF2Q9Y483 593 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-209ENST00000560715 MACROD2A1Z1Q3 448 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 TRIM43BA6NCK2 446 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 ZSCAN5CA6NGD5 496 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SART1O43290 800 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 TACC1O75410 805 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 TJP3O95049 919 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PGM3O95394 542 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 KRT1P04264 644 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CYP21A2P08686 494 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 THEGLP0DJG4 465 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PCP11498 1178 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 KCNA3P22001 575 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CYLC1P35663 651 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SKIV2L2P42285 1042 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms