RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 HSPA12BQ96MM6 686 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 MED10Q9BTT4 135 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 PANK4Q9NVE7 773 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 CALCOCO1Q9P1Z2 691 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 CYP8B1Q9UNU6 501 aa11.16□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZFYVE26Q68DK2 2539 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 CACNA1EQ15878 2313 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 ATP8B3O60423 1300 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 WDFY3Q8IZQ1 3526 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 CLDN5O00501 218 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 ADAM23O75077 832 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 SERPINF2P08697 491 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 GABRG2P18507 467 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 TNNI1P19237 187 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 YWHAQP27348 245 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 HOXD12P35452 270 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 CEBPZQ03701 1054 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 RABEP1Q15276 862 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF423Q2M1K9 1284 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 SPDYCQ5MJ68 293 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 GRAMD4Q6IC98 578 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 KIAA1324Q6UXG2 1013 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 RDH13Q8NBN7 331 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 PDZD8Q8NEN9 1154 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 SCFD1Q8WVM8 642 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 C8orf48Q96LL4 319 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 CEP295NLQ96MC4 621 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 KIF2CQ99661 725 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 MRPL45Q9BRJ2 306 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 TTLL2Q9BWV7 592 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 PANK2Q9BZ23 570 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 DNAJC17Q9NVM6 304 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-207ENST00000560492 PCDH15Q96QU1 1955 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 E2F8A0AVK6 867 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 A8MXQ7 604 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 COCHO43405 550 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 PHACTR2O75167 634 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 TULP3O75386 442 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 RTN3O95197 1032 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 OAS1P00973 400 aaKnown RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 GNSP15586 552 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 PTPN1P18031 435 aaKnown RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 NTSR1P30989 418 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 FAM193AP78312 1265 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 TRPC3Q13507 836 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 SYCP2LQ5T4T6 812 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 CBWD2Q8IUF1 395 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 CCDC65Q8IXS2 484 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 NUP93Q8N1F7 819 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 PNPLA1Q8N8W4 532 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 TRIML1Q8N9V2 468 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 TERB1Q8NA31 727 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 DNAJC19Q96DA6 116 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 CAMK1GQ96NX5 476 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 STRA6Q9BX79 667 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 FGFBP2Q9BYJ0 223 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 DPEP3Q9H4B8 488 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 SPHK2Q9NRA0 654 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 OLFML3Q9NRN5 406 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 CHORDC1Q9UHD1 332 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 PKD1L2Q7Z442 2459 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 NBEAQ8NFP9 2946 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 DSPP15924 2871 aaKnown RBP11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
CDC42BPB-207ENST00000560492 EIF4E1BA6NMX2 242 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 MEI4A8MW99 385 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 NEDD8-MDP1E9PL57 170 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 KIAA0391O15091 583 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 SH3BP5O60239 455 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 ZNF217O75362 1048 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 CYP2J2P51589 502 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 SCAPQ12770 1279 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 HNRNPDQ14103 355 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 TRIP6Q15654 476 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 EGFLAMQ63HQ2 1017 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 CCDC73Q6ZRK6 1079 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 PROSER1Q86XN7 944 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 WDR49Q8IV35 697 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 BBS7Q8IWZ6 715 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 PDILTQ8N807 584 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 B3GALNT2Q8NCR0 500 aa11.13□□□□□ -0.63
CDC42BPB-207ENST00000560492 BHMTQ93088 406 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms