RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ADORA2BP29275 332 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 ATP5C1P36542 298 aaKnown RBP14.87□□□□□ -0.03
TPM1-223ENST00000560445 DGKEP52429 567 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 PPP3CAQ08209 521 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 PNOCQ13519 176 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 DMC1Q14565 340 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 DHCR24Q15392 516 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 CSRP2Q16527 193 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 TCERG1LQ5VWI1 586 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 SPOPLQ6IQ16 392 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 PAQR9Q6ZVX9 377 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 ADGRG2Q8IZP9 1017 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 TSTD1Q8NFU3 115 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 SCAMP5Q8TAC9 235 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 NETO1Q8TDF5 533 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 DDX1Q92499 740 aaKnown RBP14.87□□□□□ -0.03
TPM1-223ENST00000560445 RNF38Q9H0F5 515 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 CYLDQ9NQC7 956 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 RAB20Q9NX57 234 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 DLL3Q9NYJ7 618 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 ARMCX3Q9UH62 379 aaPredicted RBP14.87□□□□□ -0.03
TPM1-223ENST00000560445 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 CACNA1AO00555 2505 aa14.87□□□□□ -0.03
TPM1-223ENST00000560445 SPAG17Q6Q759 2223 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 DMDP11532 3685 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 BICDL2A1A5D9 508 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
TPM1-223ENST00000560445 HRO43593 1189 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 RALAP11233 206 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 TBXAS1P24557 533 aaPredicted RBP14.86□□□□□ -0.03
TPM1-223ENST00000560445 GRIA2P42262 883 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 BYSLQ13895 437 aaKnown RBP14.86□□□□□ -0.03
TPM1-223ENST00000560445 DCAF17Q5H9S7 520 aaPredicted RBP14.86□□□□□ -0.03
TPM1-223ENST00000560445 EOGTQ5NDL2 527 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 C1orf220Q5T0J3 134 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 RMDN1Q96DB5 314 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 DHTKD1Q96HY7 919 aaPredicted RBP14.86□□□□□ -0.03
TPM1-223ENST00000560445 SMOQ99835 787 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 RTKNQ9BST9 563 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 UBXN6Q9BZV1 441 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 LINC00597Q9H2U6 94 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 TMEM30AQ9NV96 361 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 CHORDC1Q9UHD1 332 aaPredicted RBP14.86□□□□□ -0.03
TPM1-223ENST00000560445 ZNF510Q9Y2H8 683 aa14.86□□□□□ -0.03
TPM1-223ENST00000560445 MYO16Q9Y6X6 1858 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 HOXC11O43248 304 aaPredicted RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 KAT7O95251 611 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 ACO1P21399 889 aaKnown RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 OPRD1P41143 372 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 PRCPP42785 496 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 TNFRSF4P43489 277 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 LPAL2Q16609 132 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 RSPO4Q2I0M5 234 aaPredicted RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 USP39Q53GS9 565 aaKnown RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 FOXR2Q6PJQ5 311 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 CLEC20AQ6ZU45 233 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 ZNF276Q8N554 614 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 FAM160A2Q8N612 972 aaPredicted RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 C12orf29Q8N999 325 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 C12orf50Q8NA57 414 aaPredicted RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 SPATA20Q8TB22 786 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 USP33Q8TEY7 942 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 CEP63Q96MT8 703 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 XPO6Q96QU8 1125 aaKnown RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 DUSP16Q9BY84 665 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 CCSER2Q9H7U1 834 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 POLMQ9NP87 494 aaPredicted RBP14.85□□□□□ -0.03
TPM1-223ENST00000560445 ARHGEF4Q9NR80 690 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 CISHQ9NSE2 258 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 CLIC5Q9NZA1 410 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 WDR35Q9P2L0 1181 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 DEC1Q9P2X7 70 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 HESX1Q9UBX0 185 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 HMGXB4Q9UGU5 601 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 DNMT3LQ9UJW3 386 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 MMP17Q9ULZ9 603 aa14.85□□□□□ -0.03
TPM1-223ENST00000560445 EPN2O95208 641 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 DPP6P42658 865 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 PLA2G4AP47712 749 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 DMWDQ09019 674 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 SPEM2Q0P670 501 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 ORC1Q13415 861 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 HTR3DQ70Z44 454 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 CCDC186Q7Z3E2 898 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 SMYD4Q8IYR2 804 aaPredicted RBP14.84□□□□□ -0.03
TPM1-223ENST00000560445 ZMIZ2Q8NF64 920 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 TMEM176AQ96HP8 235 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 ZC3H10Q96K80 434 aaKnown RBP14.84□□□□□ -0.03
TPM1-223ENST00000560445 SPACA7Q96KW9 195 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 HHIPQ96QV1 700 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 APOBEC3GQ9HC16 384 aaKnown RBP14.84□□□□□ -0.03
TPM1-223ENST00000560445 FBRSL1Q9HCM7 1045 aaKnown RBP14.84□□□□□ -0.03
TPM1-223ENST00000560445 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 SEMA4GQ9NTN9 838 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 KIAA1257Q9ULG3 409 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 FRYLO94915 3013 aa14.84□□□□□ -0.03
TPM1-223ENST00000560445 RALGAPA1Q6GYQ0 2036 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms