RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 GRHL1Q9NZI5 618 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
SNRPA1-211ENST00000560433 TSC2P49815 1807 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 AGPSO00116 658 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 SOAT2O75908 522 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 IFNB1P01574 187 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 PECAM1P16284 738 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 CETN2P41208 172 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ACADSBP45954 432 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 GPR15P49685 360 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 SULT1E1P49888 294 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 OTUD4Q01804 1114 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 PPARDQ03181 441 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM171A1Q5VUB5 890 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 C1orf228Q6PIY5 440 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 TAS1R1Q7RTX1 841 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 POLNQ7Z5Q5 900 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ACTL9Q8TC94 416 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ZNF333Q96JL9 665 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ABI2Q9NYB9 513 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 RASAL2Q9UJF2 1139 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 NUDT5Q9UKK9 219 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ATP8A1Q9Y2Q0 1164 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 MRPL42Q9Y6G3 142 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 HHLA1C9JL84 531 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 LIASO43766 372 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 CYP11A1P05108 521 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 FYNP06241 537 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 PCK1P35558 622 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 RPL34P49207 117 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 SLC11A1P49279 550 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 FNTAP49354 379 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 PGFP49763 221 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 GDF10P55107 478 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 YWHAZP63104 245 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 CUL1Q13616 776 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 DPYSL3Q14195 570 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 KRT81Q14533 505 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM171BQ6P995 826 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ZDHHC24Q6UX98 284 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ZC3H18Q86VM9 953 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 TTC9BQ8N6N2 239 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 CMASQ8NFW8 434 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 ATL2Q8NHH9 583 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 SEC14L1Q92503 715 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 SMARCD1Q96GM5 515 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 UROC1Q96N76 676 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 DHX35Q9H5Z1 703 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM187AA6NFU0 413 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 M0QYT0 321 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 CAPN9O14815 690 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ATP8B1O43520 1251 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 AMHP03971 560 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 NCAM1P13591 858 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 IL4RP24394 825 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 GRIK1P39086 918 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 LBX1P52954 281 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SNX16P57768 344 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 PPP2R5EQ16537 467 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 CCNG2Q16589 344 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SKIDA1Q1XH10 827 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SYCP2LQ5T4T6 812 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 CCDC25Q86WR0 208 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ZDHHC17Q8IUH5 632 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SCN4BQ8IWT1 228 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 THEM5Q8N1Q8 247 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 UHMK1Q8TAS1 419 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 UBLCP1Q8WVY7 318 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 CAVIN3Q969G5 261 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ZIM3Q96PE6 472 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 FMO2Q99518 471 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 DNAI2Q9GZS0 605 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 LRRC4CQ9HCJ2 640 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM114A2Q9NRY5 505 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ZDHHC18Q9NUE0 388 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ZNF638Q14966 1978 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 VWA8A3KMH1 1905 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 GOLGA6BA6NDN3 693 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 TP73O15350 636 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 INPPL1O15357 1258 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 SYF2O95926 243 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 KRT14P02533 472 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ADCY8P40145 1251 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 MATKP42679 507 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 MTM1Q13496 603 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 ACAP1Q15027 740 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 DDR2Q16832 855 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 LRRC26Q2I0M4 334 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 EFHC1Q5JVL4 640 aa11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-211ENST00000560433 OTUD1Q5VV17 481 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms