RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 PYROXD2Q8N2H3 581 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 ADAM32Q8TC27 787 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 CCT8L2Q96SF2 557 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 SAYSD1Q9NPB0 183 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 PPANQ9NQ55 473 aaKnown RBP14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 MFHAS1Q9Y4C4 1052 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 TCRBV7S3A2A0A539 114 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 MYBPHLA2RUH7 354 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 RBP3P10745 1247 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 PNPLA4P41247 253 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 BRCC3P46736 316 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 MGAT3Q09327 533 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 ARHGAP17Q68EM7 881 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 HIBCHQ6NVY1 386 aaPredicted RBP14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 PAQR9Q6ZVX9 377 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 SYDE1Q6ZW31 735 aaPredicted RBP14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 NLRP14Q86W24 1093 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 CCDC185Q8N715 623 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 CAPNS2Q96L46 248 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 ADAM2Q99965 735 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 SELENOSQ9BQE4 189 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 MAK16Q9BXY0 300 aaKnown RBP14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 TRPV6Q9H1D0 765 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 UPF3AQ9H1J1 476 aaKnown RBP14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 CRTAC1Q9NQ79 661 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 KRT82Q9NSB4 513 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 DNALI1O14645 258 aaPredicted RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 RGS16O15492 202 aaPredicted RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 CREB1P16220 341 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 PTPN1P18031 435 aaKnown RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 PCK1P35558 622 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 LPIN1Q14693 890 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 DSTYKQ6XUX3 929 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 HFE2Q6ZVN8 426 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 GPRIN1Q7Z2K8 1008 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 ANKMY2Q8IV38 441 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 MYCBPAPQ8TBZ2 947 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 RSAD2Q8WXG1 361 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 TBCBQ99426 244 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 DHX35Q9H5Z1 703 aaKnown RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 F5H423 210 aaPredicted RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 RASGRF2O14827 1237 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 ITGB1P05556 798 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 IL4RP24394 825 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 PTPN7P35236 360 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 ITGA7Q13683 1181 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 FAXCQ5TGI0 409 aa14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 NKD2Q969F2 451 aaPredicted RBP14.7□□□□□ -0.06
CARMIL3-203ENST00000560349 KPNA6O60684 536 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 B3GAT3O94766 335 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 ITGAVP06756 1048 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 LRPAP1P30533 357 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 DCAF6Q58WW2 860 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 CLEC20AQ6ZU45 233 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 HOOK3Q86VS8 718 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 CCDC13Q8IYE1 715 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 TNIP3Q96KP6 325 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 MYCBPQ99417 103 aaPredicted RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 PCDH18Q9HCL0 1135 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 TTC4O95801 387 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 RPL22P35268 128 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 EIF3BP55884 814 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 BASP1P80723 227 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 TIGD5Q53EQ6 642 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 CCSAPQ6IQ19 270 aaPredicted RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 DEFB106AQ8N104 65 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 SMC1BQ8NDV3 1235 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 PCDH19Q8TAB3 1148 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 MLXIPLQ9NP71 852 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 SLC12A6Q9UHW9 1150 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 E7EVH7 732 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 H7C0C1 242 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 APOC4-APOC2K7ER74 178 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 MCF2LO15068 1137 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 APOC2P02655 101 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 ATP5OP48047 213 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 LMNB2Q03252 620 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 NME3Q13232 169 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 AUHQ13825 339 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 SYPL2Q5VXT5 272 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 DARS2Q6PI48 645 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 ZBED8Q8IZ13 594 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 OTUD6BQ8N6M0 293 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 PQLC3Q8N755 202 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 PLD5Q8N7P1 536 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 KLHDC9Q8NEP7 349 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 P3H4Q92791 437 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 PCED1BQ96HM7 432 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 TMEM209Q96SK2 561 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 NCAPGQ9BPX3 1015 aa14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 TPX2Q9ULW0 747 aaKnown RBP14.69□□□□□ -0.06
CARMIL3-203ENST00000560349 ATXN2Q99700 1313 aaKnown RBP14.68□□□□□ -0.06
CARMIL3-203ENST00000560349 NRP1O14786 923 aa14.68□□□□□ -0.06
CARMIL3-203ENST00000560349 GPR182O15218 404 aa14.68□□□□□ -0.06
CARMIL3-203ENST00000560349 FAM107AO95990 144 aa14.68□□□□□ -0.06
CARMIL3-203ENST00000560349 NPR3P17342 541 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms