RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 DNAJB7Q7Z6W7 309 aaPredicted RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 CCAR2Q8N163 923 aaKnown RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 JOSD2Q8TAC2 188 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 SLC35G2Q8TBE7 412 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 HDAC7Q8WUI4 952 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 ZNF707Q96C28 371 aaPredicted RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 SEPT5Q99719 369 aaPredicted RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 ULBP1Q9BZM6 244 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 MIS12Q9H081 205 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 PLEKHA4Q9H4M7 779 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 TLE6Q9H808 572 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 NMUR1Q9HB89 426 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 IL21Q9HBE4 155 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 ZNF334Q9HCZ1 680 aaPredicted RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 CNGB3Q9NQW8 809 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 ST7Q9NRC1 585 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 COMMD8Q9NX08 183 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 CALCOCO1Q9P1Z2 691 aa9.86□□□□□ -0.83
HERC1-206ENST00000559996 CNOT8Q9UFF9 292 aaKnown RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 PRRC2BQ5JSZ5 2229 aaKnown RBP9.86□□□□□ -0.83
HERC1-206ENST00000559996 A0A0A6YYK5 440 aaPredicted RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 TMEM191CA6NGB0 347 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 LINC01565O15544 149 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 MOSPD3O75425 235 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 TADA3O75528 432 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 MTA2O94776 668 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 ZBED1O96006 694 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 F11P03951 625 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 C8AP07357 584 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 CA8P35219 290 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 RFC1P35251 1148 aaPredicted RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 SCNN1AP37088 669 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 HADHBP55084 474 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 RPL10AP62906 217 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 SPA17Q15506 151 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 CTC1Q2NKJ3 1217 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 RAB6CQ53S08 254 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 HABP4Q5JVS0 413 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 SNX30Q5VWJ9 437 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 OR6B2Q6IFH4 312 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 PPP1R2P3Q6NXS1 205 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 RTL10Q7L3V2 364 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 SLC26A9Q7LBE3 791 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 ARCQ7LC44 396 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 CPNE8Q86YQ8 564 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 TMC8Q8IU68 726 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 ARFGAP1Q8N6T3 406 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 C3orf20Q8ND61 904 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 SLC7A14Q8TBB6 771 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 NT5C3BQ969T7 300 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 PSMG2Q969U7 264 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 ZNF653Q96CK0 615 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 CDCA3Q99618 268 aaPredicted RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 RAB6CQ9H0N0 254 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 NSUN3Q9H649 340 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 MAN1C1Q9NR34 630 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 TRMT1Q9NXH9 659 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 WDR35Q9P2L0 1181 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 DNMT3BQ9UBC3 853 aaKnown RBP9.85□□□□□ -0.83
HERC1-206ENST00000559996 MYO1AQ9UBC5 1043 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 SCML2Q9UQR0 700 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 CEP83Q9Y592 693 aa9.85□□□□□ -0.83
HERC1-206ENST00000559996 C2CD4BA6NLJ0 364 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 FANCGO15287 622 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 GRAP2O75791 330 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 FBXO21O94952 628 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 CCDC175P0C221 793 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 CSH1P0DML2 217 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 CSH2P0DML3 217 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 MYBL1P10243 752 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 TFE3P19532 575 aaPredicted RBP9.84□□□□□ -0.83
HERC1-206ENST00000559996 YWHAQP27348 245 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 HOXA9P31269 272 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 ELF1P32519 619 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 FLT3P36888 993 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 LTBRP36941 435 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 CCR2P41597 374 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 ALDH1A3P47895 512 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 EPHA5P54756 1037 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 SLC8A3P57103 927 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 PITX1P78337 314 aaPredicted RBP9.84□□□□□ -0.83
HERC1-206ENST00000559996 DLX2Q07687 328 aaPredicted RBP9.84□□□□□ -0.83
HERC1-206ENST00000559996 TAF10Q12962 218 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 PTPROQ16827 1216 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 OTUD1Q5VV17 481 aaPredicted RBP9.84□□□□□ -0.83
HERC1-206ENST00000559996 SYPL2Q5VXT5 272 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 SYCE2Q6PIF2 218 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 CCDC149Q6ZUS6 474 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 GAREM2Q75VX8 874 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 Q7L0L9 218 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 ZDHHC17Q8IUH5 632 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 EMC1Q8N766 993 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 EFHBQ8N7U6 833 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 C12orf76Q8N812 135 aaPredicted RBP9.84□□□□□ -0.83
HERC1-206ENST00000559996 RFFLQ8WZ73 363 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 IRGQQ8WZA9 623 aa9.84□□□□□ -0.83
HERC1-206ENST00000559996 CENPIQ92674 756 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms