RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 OR56A3Q8NH54 315 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 ZNF668Q96K58 619 aaPredicted RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 TMEM79Q9BSE2 394 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 LRRC27Q9C0I9 530 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 ZCWPW1Q9H0M4 648 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 DHX36Q9H2U1 1008 aaKnown RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 DNMT3BQ9UBC3 853 aaKnown RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 FNDC1Q4ZHG4 1894 aaPredicted RBP4.49□□□□□ -1.69
SPG11-218ENST00000559754 TCRBV5S1A1TA0A578 114 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 CD3EAPO15446 510 aaKnown RBP4.49□□□□□ -1.69
SPG11-218ENST00000559754 TMPRSS11DO60235 418 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 BCAR3O75815 825 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 RNF8O76064 485 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 INMTO95050 263 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 MT-CO3P00414 261 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 ZKSCAN1P17029 563 aaPredicted RBP4.49□□□□□ -1.69
SPG11-218ENST00000559754 ITGB6P18564 788 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 ATF3P18847 181 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 IL1R2P27930 398 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 UQCRC1P31930 480 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 ARHGAP25P42331 645 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 TIRAPP58753 221 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 LAMB3Q13751 1172 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 ZNF268Q14587 947 aaPredicted RBP4.49□□□□□ -1.69
SPG11-218ENST00000559754 PPP4R4Q6NUP7 873 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 SWSAP1Q6NVH7 229 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 APOA5Q6Q788 366 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 ZDHHC24Q6UX98 284 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 SRGAP1Q7Z6B7 1085 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 COL23A1Q86Y22 540 aaPredicted RBP4.49□□□□□ -1.69
SPG11-218ENST00000559754 ZNF366Q8N895 744 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 TTC8Q8TAM2 541 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 PIGOQ8TEQ8 1089 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 IPCEF1Q8WWN9 437 aaPredicted RBP4.49□□□□□ -1.69
SPG11-218ENST00000559754 STK31Q9BXU1 1019 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 VPS16Q9H269 839 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 WDR26Q9H7D7 661 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 CPNE7Q9UBL6 633 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 HDAC9Q9UKV0 1011 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 OGDHLQ9ULD0 1010 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 MAFFQ9ULX9 164 aa4.49□□□□□ -1.69
SPG11-218ENST00000559754 GOLGA6CA6NDK9 693 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 GOLGA6BA6NDN3 693 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 AQP7P3A6NL99 342 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 PROB1E7EW31 1015 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 H7C4K7 107 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 PRPF3O43395 683 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 RRP9O43818 475 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 MGEA5O60502 916 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 TOP3BO95985 862 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 LDHAP00338 332 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 A1BGP04217 495 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 GOLGA6DP0CG33 693 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 CD19P15391 556 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 PTDSS1P48651 473 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 PSG6Q00889 435 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 TIAL1Q01085 375 aaKnown RBP eCLIP4.48□□□□□ -1.69
SPG11-218ENST00000559754 SLC29A2Q14542 456 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 POLD3Q15054 466 aaPredicted RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 BRD3Q15059 726 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 ZNF750Q32MQ0 723 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 RNF220Q5VTB9 566 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 DARS2Q6PI48 645 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 TMEM65Q6PI78 240 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 C14orf80Q86SX3 495 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 YAF2Q8IY57 180 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 LRTOMTQ8WZ04 291 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 CUL5Q93034 780 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 FAM83DQ9H4H8 585 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 STK32BQ9NY57 414 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 GOLGA6AQ9NYA3 693 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 MGAT4CQ9UBM8 478 aa4.48□□□□□ -1.69
SPG11-218ENST00000559754 SCAF8Q9UPN6 1271 aaKnown RBP4.48□□□□□ -1.69
SPG11-218ENST00000559754 E5RJQ4 531 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 PIAS2O75928 621 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 TXNP10599 105 aaKnown RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 CREB1P16220 341 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 SFPQP23246 707 aaKnown RBP eCLIP4.47□□□□□ -1.69
SPG11-218ENST00000559754 ATP5F1P24539 256 aaPredicted RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 ACVR2AP27037 513 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 CPT1AP50416 773 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 PGDP52209 483 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 COPB1P53618 953 aaKnown RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 GHRHRQ02643 423 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 LMAN2Q12907 356 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 MAPK7Q13164 816 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 HSP90AB4PQ58FF6 505 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 MEX3CQ5U5Q3 659 aaKnown RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 CCDC149Q6ZUS6 474 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 MRPL10Q7Z7H8 261 aaKnown RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 KRT73Q86Y46 540 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 CTHRC1Q96CG8 243 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 EVI5LQ96CN4 794 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 HMCESQ96FZ2 354 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 APIPQ96GX9 242 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 ZNF48Q96MX3 618 aaPredicted RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 MPHOSPH6Q99547 160 aaKnown RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 EFHD1Q9BUP0 239 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms