RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 DPYDQ12882 1025 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 BBS7Q8IWZ6 715 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 SMYD4Q8IYR2 804 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 TXNDC5Q8NBS9 432 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 PDZD8Q8NEN9 1154 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 TAS1R2Q8TE23 839 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 ERLEC1Q96DZ1 483 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 PNKPQ96T60 521 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 NUDT5Q9UKK9 219 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 CIZ1Q9ULV3 898 aaPredicted RBP21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 SH3BP1Q9Y3L3 701 aa21.7■■□□□ 1.06
TSPAN3-206ENST00000559373 TRIM24O15164 1050 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 RHOBTB3O94955 611 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 KAT7O95251 611 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 ZNF806P0C7X5 589 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 BCKDHBP21953 392 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 MPLP40238 635 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 CREB5Q02930 508 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 KRBA2Q6ZNG9 492 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 CRYBG2Q8N1P7 616 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 ZC3H10Q96K80 434 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 CNTNAP3BQ96NU0 1288 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 CNTNAP3Q9BZ76 1288 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 NACA2Q9H009 215 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 ARHGEF4Q9NR80 690 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 IL37Q9NZH6 218 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 TRAF3IP3Q9Y228 551 aa21.69■■□□□ 1.06
TSPAN3-206ENST00000559373 E2F8A0AVK6 867 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 SGK1O00141 431 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 MDM4O15151 490 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 APODP05090 189 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 ANO4Q32M45 955 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 DDX42Q86XP3 938 aaKnown RBP eCLIP21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 TMEM25Q86YD3 366 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 FAM186BQ8IYM0 893 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 FRMD1Q8N878 549 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 MDGA1Q8NFP4 955 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 RLN3Q8WXF3 142 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 OVCA2Q8WZ82 227 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 CCDC47Q96A33 483 aaKnown RBP21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 OSER1Q9NX31 292 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 EBF1Q9UH73 591 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 MMP17Q9ULZ9 603 aa21.68■■□□□ 1.06
TSPAN3-206ENST00000559373 IKBKBO14920 756 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 CYP26A1O43174 497 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 ZNF202O95125 648 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 KIF20AO95235 890 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 ADH1CP00326 375 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 ZDHHC11BP0C7U3 371 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 ZNF394Q53GI3 561 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 PLA2G2CQ5R387 149 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 SNX30Q5VWJ9 437 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 IL17RCQ8NAC3 791 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 TMEM174Q8WUU8 243 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 CYFIP2Q96F07 1278 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 LOXL4Q96JB6 756 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 CSNK1G1Q9HCP0 422 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 TBC1D14Q9P2M4 693 aa21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 ASCC3Q8N3C0 2202 aaKnown RBP21.67■■□□□ 1.06
TSPAN3-206ENST00000559373 FAM237AA0A1B0GTK4 181 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 TLR5O60602 858 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 MYL1P05976 194 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 FAM200BP0CF97 657 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 KRT13P13646 458 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 ADAM9Q13443 819 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 CRY1Q16526 586 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 IL31Q6EBC2 164 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 CLEC20AQ6ZU45 233 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 UNC93AQ86WB7 457 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 WHAMMQ8TF30 809 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 TAF4BQ92750 862 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 NMUR1Q9HB89 426 aa21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 TLR8Q9NR97 1041 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 MAP1BP46821 2468 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-206ENST00000559373 FAM92AA1XBS5 289 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 HHLA1C9JL84 531 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 CHRM1P11229 460 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 ACO1P21399 889 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 WASP42768 502 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 GAD2Q05329 585 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 PNOCQ13519 176 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 ELF2Q15723 593 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 USP39Q53GS9 565 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 STPG1Q5TH74 334 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 TPGS1Q6ZTW0 290 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 PHTF2Q8N3S3 785 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 SEMA4DQ92854 862 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 BHMTQ93088 406 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 IMPG2Q9BZV3 1241 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 SPHK2Q9NRA0 654 aa21.65■■□□□ 1.06
TSPAN3-206ENST00000559373 CHD8Q9HCK8 2581 aa21.64■■□□□ 1.06
TSPAN3-206ENST00000559373 ACACBO00763 2458 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 A0A1W2PQH9 124 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 TBC1D3BA6NDS4 549 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 ADAM23O75077 832 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 TULP3O75386 442 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 RHOBTB1O94844 696 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 CAVIN2O95810 425 aa21.64■■□□□ 1.05
TSPAN3-206ENST00000559373 PSMC2P35998 433 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms