RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 PHLDB2Q86SQ0 1253 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 TMEM110Q86TL2 294 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 ARL14EPQ8N8R7 260 aaPredicted RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 LEMD2Q8NC56 503 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 USP13Q92995 863 aaPredicted RBP11.46□□□□□ -0.57
TPM1-217ENST00000559108 ASB16Q96NS5 453 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 CHP1Q99653 195 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 KXD1Q9BQD3 176 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 NUP58Q9BVL2 599 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 ST7Q9NRC1 585 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 ABHD10Q9NUJ1 306 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
TPM1-217ENST00000559108 USTQ9Y2C2 406 aa11.46□□□□□ -0.57
TPM1-217ENST00000559108 A0A087X0T9 212 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 SCAMP3O14828 347 aaKnown RBP11.45□□□□□ -0.58
TPM1-217ENST00000559108 FAM228BP0C875 321 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 CDC25CP30307 473 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 BPIFB4P59827 614 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 CENPCQ03188 943 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 TAF12Q16514 161 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 AAK1Q2M2I8 961 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
TPM1-217ENST00000559108 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 TANGO2Q6ICL3 276 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 OLFML1Q6UWY5 402 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 MON1BQ7L1V2 547 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 MON1AQ86VX9 555 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 ARID3BQ8IVW6 561 aaPredicted RBP11.45□□□□□ -0.58
TPM1-217ENST00000559108 ZDHHC14Q8IZN3 488 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 TDRD5Q8NAT2 981 aaKnown RBP11.45□□□□□ -0.58
TPM1-217ENST00000559108 STK32AQ8WU08 396 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 EDEM1Q92611 657 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 PPP1R13BQ96KQ4 1090 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 HSFY1Q96LI6 401 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 TASP1Q9H6P5 420 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 LRRC4Q9HBW1 653 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 TRPC7Q9HCX4 862 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 COMMD8Q9NX08 183 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 CALCOCO1Q9P1Z2 691 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 LIMD1Q9UGP4 676 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 LUC7L2Q9Y383 392 aaKnown RBP11.45□□□□□ -0.58
TPM1-217ENST00000559108 NUMBLQ9Y6R0 609 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 MYOFQ9NZM1 2061 aa11.45□□□□□ -0.58
TPM1-217ENST00000559108 TCRBV5S1A1TA0A578 114 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 ZNF197O14709 1029 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 NARSO43776 548 aaKnown RBP11.44□□□□□ -0.58
TPM1-217ENST00000559108 GREM1O60565 184 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 GRAP2O75791 330 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 LSM8O95777 96 aaKnown RBP11.44□□□□□ -0.58
TPM1-217ENST00000559108 ABL1P00519 1130 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 TPM3P06753 285 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 RARGP13631 454 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 TFE3P19532 575 aaPredicted RBP11.44□□□□□ -0.58
TPM1-217ENST00000559108 MMP8P22894 467 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 YWHAGP61981 247 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM1-217ENST00000559108 RAB6CQ53S08 254 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 SYPL2Q5VXT5 272 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 VITQ6UXI7 678 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 ZNF677Q86XU0 584 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 XYLT1Q86Y38 959 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 CMTM8Q8IZV2 173 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 SIX6OS1Q8N1H7 587 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 SCML4Q8N228 414 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 SYN2Q92777 582 aaPredicted RBP11.44□□□□□ -0.58
TPM1-217ENST00000559108 ASIC4Q96FT7 647 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 P2RY11Q96G91 374 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 SLITRK1Q96PX8 696 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 C11orf70Q9BRQ4 267 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 DNAI2Q9GZS0 605 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 RAB6CQ9H0N0 254 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 FBXO44Q9H4M3 255 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 CNGB3Q9NQW8 809 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 SMPD4Q9NXE4 827 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM1-217ENST00000559108 GDE1Q9NZC3 331 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 TRPM5Q9NZQ8 1165 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 UXTQ9UBK9 157 aaPredicted RBP11.44□□□□□ -0.58
TPM1-217ENST00000559108 PRKAG3Q9UGI9 489 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 NAGPAQ9UK23 515 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.44□□□□□ -0.586e-8■□□□□ 10.6
TPM1-217ENST00000559108 MIA3Q5JRA6 1907 aa11.44□□□□□ -0.58
TPM1-217ENST00000559108 TMCO5BA8MYB1 307 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 ZNF263O14978 683 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
TPM1-217ENST00000559108 MSI1O43347 362 aaKnown RBP11.43□□□□□ -0.58
TPM1-217ENST00000559108 TLR5O60602 858 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 FGF19O95750 216 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 SERPING1P05155 500 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 CDC25BP30305 580 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 EIF4A3P38919 411 aaKnown RBP11.43□□□□□ -0.58
TPM1-217ENST00000559108 GABRB2P47870 512 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 KLHL30Q0D2K2 578 aa11.43□□□□□ -0.58
TPM1-217ENST00000559108 USP4Q13107 963 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms