RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 GALCP54803 685 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 YWHAGP61981 247 aaKnown RBP eCLIP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 GPC5P78333 572 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 NTHL1P78549 312 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CCZ1BP86790 482 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CCZ1P86791 482 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CYP4F8P98187 520 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 SLC6A3Q01959 620 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 DLX2Q07687 328 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 MTF1Q14872 753 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 ARHGAP15Q53QZ3 475 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 BTBD8Q5XKL5 378 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 PM20D1Q6GTS8 502 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 DCUN1D2Q6PH85 259 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 SYCE2Q6PIF2 218 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 OLFML1Q6UWY5 402 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 RSRC2Q7L4I2 434 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 SLC26A9Q7LBE3 791 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 PHLDB2Q86SQ0 1253 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 KIAA1328Q86T90 577 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 TADA2BQ86TJ2 420 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 MON1AQ86VX9 555 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 DNAAF5Q86Y56 855 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 TMC8Q8IU68 726 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 SCML4Q8N228 414 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 C3orf20Q8ND61 904 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 ACRBPQ8NEB7 543 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 MAFAQ8NHW3 353 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CLEC4CQ8WTT0 213 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 RNF139Q8WU17 664 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 HLA-CQ95604 372 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CDK5RAP1Q96SZ6 601 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 DESI2Q9BSY9 194 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 NACA2Q9H009 215 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 ADAM7Q9H2U9 754 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 SLITRK6Q9H5Y7 841 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 TRPC7Q9HCX4 862 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 ZNF334Q9HCZ1 680 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 PARVAQ9NVD7 372 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 ASNSD1Q9NWL6 643 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 HCFC1R1Q9NWW0 138 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CTTNBP2NLQ9P2B4 639 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 DNMT3BQ9UBC3 853 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 MYO1AQ9UBC5 1043 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CNOT8Q9UFF9 292 aaKnown RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CHORDC1Q9UHD1 332 aaPredicted RBP6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 NENFQ9UMX5 172 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 COG5Q9UP83 839 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 PCDHA13Q9Y5I0 950 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 NCANO14594 1321 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 CLUHO75153 1309 aa6.92□□□□□ -1.3
CHRNA3-204ENST00000559002 PTPRDP23468 1912 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 ATG2AQ2TAZ0 1938 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 ZNF840PA6NDX5 716 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 YJEFN3A6XGL0 299 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 E7ENQ6 273 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 ZNF263O14978 683 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 DAB1O75553 588 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 GRAP2O75791 330 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 GABBR2O75899 941 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 PAPLNO95428 1278 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 LCA5LO95447 670 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 F11P03951 625 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 GLI1P08151 1106 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 CCDC175P0C221 793 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 TMEM253P0C7T8 217 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 KRT3P12035 628 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 NCAM1P13591 858 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 RARGP13631 454 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 FSHRP23945 695 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 DDX6P26196 483 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 LTBRP36941 435 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 VAV2P52735 878 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 EPHA5P54756 1037 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 GSCP56915 257 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 RNASE9P60153 205 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 YWHAZP63104 245 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 PTP4A2Q12974 167 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 SMAD4Q13485 552 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 HECTD3Q5T447 861 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 BSPRYQ5W0U4 402 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 HFE2Q6ZVN8 426 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 GET4Q7L5D6 327 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 SCD5Q86SK9 330 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 SMRP1Q8NCR6 262 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 ING5Q8WYH8 240 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 NDRG1Q92597 394 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 EDEM1Q92611 657 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 TRIM44Q96DX7 344 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 TCEAL4Q96EI5 215 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 MCRS1Q96EZ8 462 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 PIWIL1Q96J94 861 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 MSLNLQ96KJ4 702 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 MCEEQ96PE7 176 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 NUP85Q9BW27 656 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 PACSIN1Q9BY11 444 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms