RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CDH23Q9H251 3354 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 C2CD4BA6NLJ0 364 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 PALMO75781 387 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 LTFP02788 710 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 EPCAMP16422 314 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 HMGA1P17096 107 aaKnown RBP18.95■□□□□ 0.62
CLPX-203ENST00000558958 FLT3P36888 993 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 OGDHQ02218 1023 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 VEPH1Q14D04 833 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 DUSP6Q16828 381 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 ZNF569Q5MCW4 686 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 PRPF38BQ5VTL8 546 aaKnown RBP18.95■□□□□ 0.62
CLPX-203ENST00000558958 TRNP1Q6NT89 227 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 TRIM58Q8NG06 486 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 FNIP1Q8TF40 1166 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 HDAC7Q8WUI4 952 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 POPDC2Q9HBU9 364 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 MAN1C1Q9NR34 630 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 EHD2Q9NZN4 543 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 LCMT1Q9UIC8 334 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 HCFC2Q9Y5Z7 792 aa18.95■□□□□ 0.62
CLPX-203ENST00000558958 MYO9BQ13459 2157 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 GREB1Q4ZG55 1949 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 FYNP06241 537 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 NRIP1P48552 1158 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 GNG11P61952 73 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 ZNF252P-AS1Q0IIN9 211 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 TAF10Q12962 218 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 MESDQ14696 234 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 C11orf63Q6NUN7 778 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 DNAJB7Q7Z6W7 309 aaPredicted RBP18.94■□□□□ 0.62
CLPX-203ENST00000558958 SLFN11Q7Z7L1 901 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 SCD5Q86SK9 330 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 DAAM2Q86T65 1068 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 MON1AQ86VX9 555 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 RXFP2Q8WXD0 754 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 FBXO32Q969P5 355 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 PSMG2Q969U7 264 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 TRMT2BQ96GJ1 504 aaKnown RBP18.94■□□□□ 0.62
CLPX-203ENST00000558958 MYRFLQ96LU7 910 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 C16orf45Q96MC5 204 aaPredicted RBP18.94■□□□□ 0.62
CLPX-203ENST00000558958 ALS2CR12Q96Q35 445 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 SLC2A13Q96QE2 648 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 TTYH1Q9H313 450 aaPredicted RBP18.94■□□□□ 0.62
CLPX-203ENST00000558958 IP6K2Q9UHH9 426 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 DPP7Q9UHL4 492 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 MAGED2Q9UNF1 606 aaPredicted RBP18.94■□□□□ 0.62
CLPX-203ENST00000558958 ASB3Q9Y575 518 aa18.94■□□□□ 0.62
CLPX-203ENST00000558958 DAB1O75553 588 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 ZMYND10O75800 440 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 PROSCO94903 275 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 LRG1P02750 347 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 PDGFRAP16234 1089 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 MATKP42679 507 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 PGFP49763 221 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 ZNF143P52747 638 aaPredicted RBP18.93■□□□□ 0.62
CLPX-203ENST00000558958 YWHAGP61981 247 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLPX-203ENST00000558958 ETF1P62495 437 aaKnown RBP18.93■□□□□ 0.62
CLPX-203ENST00000558958 PPM1LQ5SGD2 360 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 BSPRYQ5W0U4 402 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 BEND5Q7L4P6 421 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 ITIH5Q86UX2 942 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 DEFB106AQ8N104 65 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 SLC35F6Q8N357 371 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 GOLGA1Q92805 767 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 PPP2R3CQ969Q6 453 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 CDCA3Q99618 268 aaPredicted RBP18.93■□□□□ 0.62
CLPX-203ENST00000558958 DDX23Q9BUQ8 820 aaKnown RBP18.93■□□□□ 0.62
CLPX-203ENST00000558958 GOLPH3Q9H4A6 298 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 NMUR1Q9HB89 426 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLPX-203ENST00000558958 GMIPQ9P107 970 aa18.93■□□□□ 0.62
CLPX-203ENST00000558958 MTCL1Q9Y4B5 1905 aaKnown RBP18.93■□□□□ 0.62
CLPX-203ENST00000558958 DPYSL4O14531 572 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 GPD1P21695 349 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 HOXA9P31269 272 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 PIGHQ14442 188 aaPredicted RBP18.92■□□□□ 0.62
CLPX-203ENST00000558958 TAF12Q16514 161 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 SYCE1Q8N0S2 351 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 ARHGAP18Q8N392 663 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 NIPA2Q8N8Q9 360 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 SLITRK1Q96PX8 696 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 WDR24Q96S15 920 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 CNPY3Q9BT09 278 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 TRIM62Q9BVG3 475 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 LMCD1Q9NZU5 365 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 ALG6Q9Y672 507 aa18.92■□□□□ 0.62
CLPX-203ENST00000558958 A0A1W2PQH9 124 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 TMEM110-MUSTN1A8MSY1 372 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 SOX1O00570 391 aaPredicted RBP18.91■□□□□ 0.62
CLPX-203ENST00000558958 ZDHHC11BP0C7U3 371 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 PSMA2P25787 234 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 SDC4P31431 198 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 MAN1A1P33908 653 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 NOS2P35228 1153 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 KCNC3Q14003 757 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 CCDC14Q49A88 953 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 DCAF6Q58WW2 860 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 OVCA2Q8WZ82 227 aa18.91■□□□□ 0.62
CLPX-203ENST00000558958 NT5C3BQ969T7 300 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms