RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TBC1D30Q9Y2I9 924 aa5.11□□□□□ -1.59
CASC4-206ENST00000558847 TMEM191CA6NGB0 347 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 EFCAB8A8MWE9 144 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 hCG_1984214I3L0E3 225 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 FCHO1O14526 889 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 ACTL6BO94805 426 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 ELANEP08246 267 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 LAG3P18627 525 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 CST5P28325 142 aaPredicted RBP5.1□□□□□ -1.59
CASC4-206ENST00000558847 PTGS2P35354 604 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 ZEB1P37275 1124 aaPredicted RBP5.1□□□□□ -1.59
CASC4-206ENST00000558847 MCM2P49736 904 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 GATMP50440 423 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 NXPH1P58417 271 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 AP2B1P63010 937 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 TIAL1Q01085 375 aaKnown RBP eCLIP5.1□□□□□ -1.59
CASC4-206ENST00000558847 TBX2Q13207 712 aaPredicted RBP5.1□□□□□ -1.59
CASC4-206ENST00000558847 GEN1Q17RS7 908 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 CD300EQ496F6 205 aaPredicted RBP5.1□□□□□ -1.59
CASC4-206ENST00000558847 ABLIM2Q6H8Q1 611 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 KCTD20Q7Z5Y7 419 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 THAP4Q8WY91 577 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 FUBP1Q96AE4 644 aaKnown RBP5.1□□□□□ -1.59
CASC4-206ENST00000558847 MYEOVQ96EZ4 313 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 ADAM2Q99965 735 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 TBCCD1Q9NVR7 557 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 GJD2Q9UKL4 321 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 FZD1Q9UP38 647 aa5.1□□□□□ -1.59
CASC4-206ENST00000558847 MRPS17Q9Y2R5 130 aaKnown RBP5.1□□□□□ -1.59
CASC4-206ENST00000558847 CENPVL1A0A0U1RR11 272 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 TMEM200CA6NKL6 621 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 IPO5O00410 1097 aaKnown RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 NCAM2O15394 837 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 ZSCAN9O15535 394 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 TNFRSF6BO95407 300 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 CSF1RP07333 972 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 SRGNP10124 158 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 UQCRC1P31930 480 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 BLOC1S1P78537 153 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 CSHL1Q14406 222 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 ST3GAL2Q16842 350 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 SULT6B1Q6IMI4 303 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 DPY19L2P1Q6NXN4 242 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 JMJD6Q6NYC1 403 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 SLC44A2Q8IWA5 706 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 ABRAQ8N0Z2 381 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 SYNE4Q8N205 404 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.09□□□□□ -1.59
CASC4-206ENST00000558847 B3GALNT2Q8NCR0 500 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 NGDNQ8NEJ9 315 aaKnown RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 RSPRY1Q96DX4 576 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 UBXN10Q96LJ8 280 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 PYM1Q9BRP8 204 aaKnown RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 VN1R3Q9BXE9 311 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 TPSD1Q9BZJ3 242 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 GBA2Q9HCG7 927 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 VSX1Q9NZR4 365 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 PDP2Q9P2J9 529 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 VPS51Q9UID3 782 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 SERTAD3Q9UJW9 196 aa5.09□□□□□ -1.59
CASC4-206ENST00000558847 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.09□□□□□ -1.59
CASC4-206ENST00000558847 COL15A1P39059 1388 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 PNMA6EA0A0J9YXQ4 647 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 HMX3A6NHT5 357 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 PSMD9O00233 223 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 PCDH17O14917 1159 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 SLC16A3O15427 465 aaKnown RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 LPXNO60711 386 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 FAM155BO75949 473 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 USP1O94782 785 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 NXPH3O95157 252 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ONECUT2O95948 504 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ANXA6P08133 673 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ARP10275 920 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 BMP5P22003 454 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ADD2P35612 726 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 CDK7P50613 346 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 SCAPQ12770 1279 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 RESTQ13127 1097 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 TIGD6Q17RP2 521 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 JAKMIP3Q5VZ66 844 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 LAIR1Q6GTX8 287 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 NFRKBQ6P4R8 1299 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 DTX2Q86UW9 622 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ULK2Q8IYT8 1036 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 IZUMO1Q8IYV9 350 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 FSTL5Q8N475 847 aaPredicted RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 CPEB3Q8NE35 698 aaKnown RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 OR6Y1Q8NGX8 325 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 CPT1BQ92523 772 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 HAS1Q92839 578 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 DDX23Q9BUQ8 820 aaKnown RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 ALG8Q9BVK2 526 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 ACTRT3Q9BYD9 372 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 AMBRA1Q9C0C7 1298 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 PABPC3Q9H361 631 aaKnown RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 SERHL2Q9H4I8 314 aa5.08□□□□□ -1.6
CASC4-206ENST00000558847 UNKLQ9H9P5 680 aaKnown RBP5.08□□□□□ -1.6
CASC4-206ENST00000558847 GLOD4Q9HC38 313 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms