RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ANKRD52Q8NB46 1076 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 ATOH1Q92858 354 aaPredicted RBP11.6□□□□□ -0.55
PBX1-213ENST00000558796 ATP2A3Q93084 1043 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 CHFRQ96EP1 664 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 MSANTD3Q96H12 275 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 ZFRQ96KR1 1074 aaKnown RBP11.6□□□□□ -0.55
PBX1-213ENST00000558796 ZSWIM1Q9BR11 485 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 LINC00597Q9H2U6 94 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 NMUR1Q9HB89 426 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 UBE2TQ9NPD8 197 aaPredicted RBP11.6□□□□□ -0.55
PBX1-213ENST00000558796 SAMSN1Q9NSI8 373 aaKnown RBP11.6□□□□□ -0.55
PBX1-213ENST00000558796 RBM12Q9NTZ6 932 aaKnown RBP11.6□□□□□ -0.55
PBX1-213ENST00000558796 HESX1Q9UBX0 185 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 NAGPAQ9UK23 515 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 NUDT5Q9UKK9 219 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 NFE2L3Q9Y4A8 694 aa11.6□□□□□ -0.55
PBX1-213ENST00000558796 ZFHX2Q9C0A1 2572 aaPredicted RBP11.6□□□□□ -0.55
PBX1-213ENST00000558796 PES1O00541 588 aaKnown RBP11.59□□□□□ -0.55
PBX1-213ENST00000558796 XPO1O14980 1071 aaKnown RBP11.59□□□□□ -0.55
PBX1-213ENST00000558796 NCAM2O15394 837 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 TBX18O95935 607 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 PAEPP09466 180 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 ZNF132P52740 706 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 MLLT6P55198 1093 aaPredicted RBP11.59□□□□□ -0.55
PBX1-213ENST00000558796 ADIGQ0VDE8 80 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 STX1AQ16623 288 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 ARHGAP44Q17R89 818 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 EXOC3L4Q17RC7 722 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 MIIPQ5JXC2 388 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 SASS6Q6UVJ0 657 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 CCDC186Q7Z3E2 898 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 SCD5Q86SK9 330 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.55
PBX1-213ENST00000558796 C1orf210Q8IVY1 113 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 WBP2Q969T9 261 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 CLDN23Q96B33 292 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 NELL2Q99435 816 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 TUBGCP2Q9BSJ2 902 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 LMAN1LQ9HAT1 526 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 TAB2Q9NYJ8 693 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
PBX1-213ENST00000558796 AJAP1Q9UKB5 411 aaPredicted RBP11.59□□□□□ -0.55
PBX1-213ENST00000558796 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
PBX1-213ENST00000558796 GTPBP10A4D1E9 387 aaKnown RBP11.58□□□□□ -0.56
PBX1-213ENST00000558796 PIK3R2O00459 728 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 NFATC1O95644 943 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 CYP17A1P05093 508 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 SETSIPP0DME0 302 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 CHRNB1P11230 501 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 RARGP13631 454 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 PON1P27169 355 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 GJA4P35212 333 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 MAGEA9P43362 315 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 RPS9P46781 194 aaKnown RBP11.58□□□□□ -0.56
PBX1-213ENST00000558796 RGS7P49802 495 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 TKTL1P51854 596 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 MFAP3P55082 362 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 MTAPQ13126 283 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 LRRC32Q14392 662 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 VWA3BQ502W6 1294 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 TCP11X2Q5H9J9 407 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 RAB41Q5JT25 222 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 C10orf120Q5SQS8 335 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 C1orf228Q6PIY5 440 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 LCLAT1Q6UWP7 414 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 Q6ZS52 159 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 NDRG1Q92597 394 aaKnown RBP11.58□□□□□ -0.56
PBX1-213ENST00000558796 SECISBP2LQ93073 1101 aaKnown RBP11.58□□□□□ -0.56
PBX1-213ENST00000558796 ULBP1Q9BZM6 244 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 CHRDQ9H2X0 955 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 SIX2Q9NPC8 291 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 CYLDQ9NQC7 956 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.58□□□□□ -0.56
PBX1-213ENST00000558796 KIAA1257Q9ULG3 409 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 SH3BP1Q9Y3L3 701 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 USP3Q9Y6I4 520 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 RALGAPA1Q6GYQ0 2036 aa11.58□□□□□ -0.56
PBX1-213ENST00000558796 RIF1Q5UIP0 2472 aaKnown RBP11.58□□□□□ -0.56
PBX1-213ENST00000558796 FAM186AA6NE01 2351 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 LAMTOR5O43504 91 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 ZBED1O96006 694 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 LCP1P13796 627 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 USP8P40818 1118 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 YWHAGP61981 247 aaKnown RBP eCLIP11.57□□□□□ -0.56
PBX1-213ENST00000558796 PKDCCQ504Y2 493 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 CT47A1Q5JQC4 288 aaPredicted RBP11.57□□□□□ -0.56
PBX1-213ENST00000558796 FSTL4Q6MZW2 842 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
PBX1-213ENST00000558796 MIB1Q86YT6 1006 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 BBS7Q8IWZ6 715 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 MAML2Q8IZL2 1156 aaPredicted RBP11.57□□□□□ -0.56
PBX1-213ENST00000558796 SIX6OS1Q8N1H7 587 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
PBX1-213ENST00000558796 UBXN6Q9BZV1 441 aa11.57□□□□□ -0.56
PBX1-213ENST00000558796 IRF2BPLQ9H1B7 796 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms