RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 WNT6Q9Y6F9 365 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 SPAG17Q6Q759 2223 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 RALGAPA1Q6GYQ0 2036 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 MYH10P35580 1976 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 EML5Q05BV3 1969 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC163A0A0D9SF12 145 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 OTOL1A6NHN0 477 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 PDXKO00764 312 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 SLC9A3R1O14745 358 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CALUO43852 315 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 FOXD2O60548 495 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 RTN3O95197 1032 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 OLFM2O95897 454 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CST3P01034 146 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 EGFP01133 1207 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 NR3C1P04150 777 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 PTPN1P18031 435 aaKnown RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CMA1P23946 247 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 GJA4P35212 333 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 PIK3CAP42336 1068 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CASP4P49662 377 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 SLC7A9P82251 487 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 DMWDQ09019 674 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 IFRD2Q12894 506 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 RSPO4Q2I0M5 234 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 PLEKHO2Q8TD55 490 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 PARD3BQ8TEW8 1205 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 TMEM174Q8WUU8 243 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 OVCA2Q8WZ82 227 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 TAF4BQ92750 862 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 FBXO32Q969P5 355 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CHFRQ96EP1 664 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 SMARCD1Q96GM5 515 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 PAGE5Q96GU1 130 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC34Q96HJ3 373 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 SLC22A12Q96S37 553 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 CYP2S1Q96SQ9 504 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 IMPG2Q9BZV3 1241 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 KCTD10Q9H3F6 313 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 DPEP3Q9H4B8 488 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 DMAP1Q9NPF5 467 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 KRT82Q9NSB4 513 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
TRAF3-205ENST00000558700 HPSEQ9Y251 543 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 FRMD4BQ9Y2L6 1034 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 FRYLO94915 3013 aa8.56□□□□□ -1.04
TRAF3-205ENST00000558700 WDR87Q6ZQQ6 2873 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 A0A1B0GVL5 298 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 ZNF840PA6NDX5 716 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 RPP40O75818 363 aaKnown RBP8.55□□□□□ -1.04
TRAF3-205ENST00000558700 AKAP3O75969 853 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 OAS1P00973 400 aaKnown RBP8.55□□□□□ -1.04
TRAF3-205ENST00000558700 RPN1P04843 607 aaKnown RBP8.55□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC192P0DO97 292 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 SYKP43405 635 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 RAP1GAPP47736 663 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 TAF10Q12962 218 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 STK4Q13043 487 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 SRSF5Q13243 272 aaKnown RBP8.55□□□□□ -1.04
TRAF3-205ENST00000558700 ZACNQ401N2 412 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 CEP135Q66GS9 1140 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 PKN3Q6P5Z2 889 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 CAMKK1Q8N5S9 505 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 RPLP0P6Q8NHW5 317 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 NETO1Q8TDF5 533 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 GAB3Q8WWW8 586 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 FOXJ1Q92949 421 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 MED10Q9BTT4 135 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 B3GNT5Q9BYG0 378 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
TRAF3-205ENST00000558700 PARD6AQ9NPB6 346 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 DMAC2Q9NW81 257 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 C2orf42Q9NWW7 574 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 DCTN4Q9UJW0 460 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 NME7Q9Y5B8 376 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 CPQQ9Y646 472 aa8.55□□□□□ -1.04
TRAF3-205ENST00000558700 FAM237AA0A1B0GTK4 181 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 A0A1W2PQ27 194 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 A0A1W2PQ64 194 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 A0A1W2PQD8 194 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 LEFTY2O00292 366 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 CLDN5O00501 218 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 MAPK13O15264 365 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 RHOBTB3O94955 611 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 VNN1O95497 513 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 APBB3O95704 486 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 ADH1CP00326 375 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 ASS1P00966 412 aaKnown RBP8.54□□□□□ -1.04
TRAF3-205ENST00000558700 C4BPAP04003 597 aaKnown RBP8.54□□□□□ -1.04
TRAF3-205ENST00000558700 CYP17A1P05093 508 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 MBL2P11226 248 aaPredicted RBP8.54□□□□□ -1.04
TRAF3-205ENST00000558700 KRT13P13646 458 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 NR2F2P24468 414 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 YWHAQP27348 245 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 TUBP50607 506 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 GALK1P51570 392 aa8.54□□□□□ -1.04
TRAF3-205ENST00000558700 SLC5A3P53794 718 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms