RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 UBE2TQ9NPD8 197 aaPredicted RBP12.38□□□□□ -0.43
SHF-204ENST00000558685 ACP6Q9NPH0 428 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 CYLDQ9NQC7 956 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 RBM12Q9NTZ6 932 aaKnown RBP12.38□□□□□ -0.43
SHF-204ENST00000558685 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 CFAP97Q9P2B7 532 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 AJAP1Q9UKB5 411 aaPredicted RBP12.38□□□□□ -0.43
SHF-204ENST00000558685 NUDT5Q9UKK9 219 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 KIAA1257Q9ULG3 409 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 MRPS17Q9Y2R5 130 aaKnown RBP12.38□□□□□ -0.43
SHF-204ENST00000558685 WDR87Q6ZQQ6 2873 aa12.38□□□□□ -0.43
SHF-204ENST00000558685 RIF1Q5UIP0 2472 aaKnown RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 HELZP42694 1942 aaKnown RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 GTPBP10A4D1E9 387 aaKnown RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 BECN2A8MW95 431 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 XPO1O14980 1071 aaKnown RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 TLR5O60602 858 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 GJA4P35212 333 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 MTAPQ13126 283 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 CCINQ13939 588 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 PON2Q15165 354 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 CNGA2Q16280 664 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 MAN2A1Q16706 1144 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 TPD52L1Q16890 204 aaPredicted RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 PM20D1Q6GTS8 502 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 GBP6Q6ZN66 633 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 ADGRG2Q8IZP9 1017 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 SLC35F5Q8WV83 523 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 MSANTD3Q96H12 275 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 TUBGCP2Q9BSJ2 902 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 KLF16Q9BXK1 252 aaPredicted RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 DNAI2Q9GZS0 605 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 CHRDQ9H2X0 955 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 TLR8Q9NR97 1041 aaKnown RBP12.37□□□□□ -0.43
SHF-204ENST00000558685 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHF-204ENST00000558685 DACH1Q9UI36 760 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHF-204ENST00000558685 NFE2L3Q9Y4A8 694 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 GPR179Q6PRD1 2367 aa12.37□□□□□ -0.43
SHF-204ENST00000558685 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 TRDMT1O14717 391 aaKnown RBP12.36□□□□□ -0.43
SHF-204ENST00000558685 MDM4O15151 490 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 MBD3O95983 291 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 RARGP13631 454 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 PLA2G4AP47712 749 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 GALK1P51570 392 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 TKTL1P51854 596 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 BCAT1P54687 386 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 BST2Q10589 180 aaKnown RBP12.36□□□□□ -0.43
SHF-204ENST00000558685 KCNMA1Q12791 1236 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 EXOC3L4Q17RC7 722 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 TMEM196Q5HYL7 178 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 CDKAL1Q5VV42 579 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 FSTL4Q6MZW2 842 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 PMF1Q6P1K2 205 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 Q6ZS52 159 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 ZNF276Q8N554 614 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 KIAA1958Q8N8K9 716 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 ATOH1Q92858 354 aaPredicted RBP12.36□□□□□ -0.43
SHF-204ENST00000558685 ATP2A3Q93084 1043 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 ULBP1Q9BZM6 244 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 C2orf42Q9NWW7 574 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 APEX2Q9UBZ4 518 aa12.36□□□□□ -0.43
SHF-204ENST00000558685 VPS13AQ96RL7 3174 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 E2F8A0AVK6 867 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 NCAM2O15394 837 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 ZBED1O96006 694 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 CYP17A1P05093 508 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 SP9P0CG40 484 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 TDGF1P13385 188 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 HOXC13P31276 330 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 IFNAR2P48551 515 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 MESP2Q0VG99 397 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 NCAPHQ15003 741 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 DHCR24Q15392 516 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 KLHDC10Q6PID8 442 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 FAM114A1Q8IWE2 563 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 CPA6Q8N4T0 437 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 KCTD13Q8WZ19 329 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 SHC3Q92529 594 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 SECISBP2LQ93073 1101 aaKnown RBP12.35□□□□□ -0.43
SHF-204ENST00000558685 P2RY11Q96G91 374 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 HSD3B7Q9H2F3 369 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 FANCLQ9NW38 375 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 SPATA6Q9NWH7 488 aaPredicted RBP12.35□□□□□ -0.43
SHF-204ENST00000558685 CLIC5Q9NZA1 410 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 HESX1Q9UBX0 185 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
SHF-204ENST00000558685 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
SHF-204ENST00000558685 MYO16Q9Y6X6 1858 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms