RNA–Protein interactions for RNA: ENST00000558452.1

RNF31-206, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-206	ENST00000558452	RAD23B	P54727	409 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	STX17	P56962	302 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	PAK1	Q13153	545 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	NCAPH	Q15003	741 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	TMEM196	Q5HYL7	178 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	HECTD3	Q5T447	861 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	TSSK4	Q6SA08	328 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	SYNPO	Q8N3V7	929 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	ANKRD20A12P	Q8NF67	263 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	NELL1	Q92832	810 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	ATP2A3	Q93084	1043 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	HEXIM2	Q96MH2	286 aa	Known RBP	13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	DUSP16	Q9BY84	665 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	LINC00597	Q9H2U6	94 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	GMIP	Q9P107	970 aa		13.57	□□□□□ -0.24
RNF31-206	ENST00000558452	COCH	O43405	550 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	GNA14	O95837	355 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	PTMA	P06454	111 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	ACO1	P21399	889 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	TUB	P50607	506 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	GALK1	P51570	392 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	ZNF75D	P51815	510 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	MARS	P56192	900 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	NR1H3	Q13133	447 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	CUL2	Q13617	745 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	PPP2R5D	Q14738	602 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	TPD52L1	Q16890	204 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	ARHGAP17	Q68EM7	881 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	FSTL4	Q6MZW2	842 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	GPRIN1	Q7Z2K8	1008 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	SPEM1	Q8N4L4	309 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	ZBTB44	Q8NCP5	570 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	JAKMIP2	Q96AA8	810 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	SRRT	Q9BXP5	876 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	CCSER2	Q9H7U1	834 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	TLR8	Q9NR97	1041 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	SMPD4	Q9NXE4	827 aa		13.56	□□□□□ -0.24
RNF31-206	ENST00000558452	P4HA2	O15460	535 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	NFATC1	O95644	943 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	FGFR1OP	O95684	399 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	TDGF1	P13385	188 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	TBXAS1	P24557	533 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	CXCL12	P48061	93 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	PGF	P49763	221 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	KIF11	P52732	1056 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	YWHAE	P62258	255 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	SATB1	Q01826	763 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	LRMP	Q12912	555 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452		Q6ZS52	159 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	TRIM59	Q8IWR1	403 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	ADGRG2	Q8IZP9	1017 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	UBR7	Q8N806	425 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	CD101	Q93033	1021 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	EXOC4	Q96A65	974 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	ZFR	Q96KR1	1074 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	ZSCAN32	Q9NX65	697 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	CFAP97	Q9P2B7	532 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	IMPACT	Q9P2X3	320 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	SCML2	Q9UQR0	700 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	PCDHGA2	Q9Y5H1	932 aa		13.55	□□□□□ -0.24
RNF31-206	ENST00000558452	E2F8	A0AVK6	867 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	SLC9A3R1	O14745	358 aa	Predicted RBP	13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	TLR5	O60602	858 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	LILRB5	O75023	590 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	SERPINC1	P01008	464 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	LMNA	P02545	664 aa	Known RBP	13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	CDK11B	P21127	795 aa	Known RBP	13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	DRD1	P21728	446 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	CETN1	Q12798	172 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	KCNH2	Q12809	1159 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	FAM114A1	Q8IWE2	563 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	LMO3	Q8TAP4	145 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	ATRIP	Q8WXE1	791 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	NT5C1B	Q96P26	610 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	P2RY13	Q9BPV8	354 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	UBXN6	Q9BZV1	441 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	NMUR1	Q9HB89	426 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	CYLD	Q9NQC7	956 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	TBC1D14	Q9P2M4	693 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	NFE2L3	Q9Y4A8	694 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	USP3	Q9Y6I4	520 aa		13.54	□□□□□ -0.24
RNF31-206	ENST00000558452	USP34	Q70CQ2	3546 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	CYP26A1	O43174	497 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	PAPSS2	O95340	614 aa	Predicted RBP	13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	EGF	P01133	1207 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	PRKCSH	P14314	528 aa	Predicted RBP	13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	PSEN1	P49768	467 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	NRL	P54845	237 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	DHCR24	Q15392	516 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	GAB4	Q2WGN9	574 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	FBXO43	Q4G163	708 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	FILIP1L	Q4L180	1135 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	SGO2	Q562F6	1265 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	NAIF1	Q69YI7	327 aa	Predicted RBP	13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	CCDC186	Q7Z3E2	898 aa		13.53	□□□□□ -0.24
RNF31-206	ENST00000558452	PIGZ	Q86VD9	579 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms