RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 HCRTO43612 131 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 PDGFBP01127 241 aaPredicted RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 ACO1P21399 889 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 DRD1P21728 446 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 EEF1GP26641 437 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 BPIFB4P59827 614 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 BST2Q10589 180 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 MAN2A1Q16706 1144 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 ZNF528Q3MIS6 628 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 CBWD6Q4V339 395 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 ZNF394Q53GI3 561 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 CBWD3Q5JTY5 395 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 CBWD5Q5RIA9 395 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 STXBP5Q5T5C0 1151 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 KLHDC10Q6PID8 442 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 RSRC2Q7L4I2 434 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 C1orf210Q8IVY1 113 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 ARL14EPQ8N8R7 260 aaPredicted RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 FEZF2Q8TBJ5 459 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 SH3RF2Q8TEC5 729 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 DUSP9Q99956 384 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 PLA2G2FQ9BZM2 168 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 DCLK3Q9C098 648 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 SDCBP2Q9H190 292 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 RBSNQ9H1K0 784 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 APOBEC3GQ9HC16 384 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 CLIC5Q9NZA1 410 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 GCNT4Q9P109 453 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 DNMT3LQ9UJW3 386 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 NDRG2Q9UN36 371 aaKnown RBP9.13□□□□□ -0.95
USP3-208ENST00000558285 DAAM1Q9Y4D1 1078 aa9.13□□□□□ -0.95
USP3-208ENST00000558285 DOCK8Q8NF50 2099 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 TLR5O60602 858 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 PRAMEF12O95522 483 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 KRT5P13647 590 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 CTHP32929 405 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 PLA2G4AP47712 749 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 COG7P83436 770 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 LRMPQ12912 555 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 USP4Q13107 963 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 ANGPT1Q15389 498 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 STX1AQ16623 288 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 MEA1Q16626 185 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 EXOC3L4Q17RC7 722 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 FKBP15Q5T1M5 1219 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 CCDC183Q5T5S1 534 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 TMEM270Q6UE05 265 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 CLEC20AQ6ZU45 233 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 TMEM150AQ86TG1 271 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 FMNL3Q8IVF7 1028 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 RNF139Q8WU17 664 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 ATRIPQ8WXE1 791 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 SEMA4DQ92854 862 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 ACDQ96AP0 544 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 CLDN23Q96B33 292 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 KCNK16Q96T55 309 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 IL37Q9NZH6 218 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 NAGPAQ9UK23 515 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 MYO10Q9HD67 2058 aa9.12□□□□□ -0.95
USP3-208ENST00000558285 FAM92AA1XBS5 289 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 LEFTY2O00292 366 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 XPO1O14980 1071 aaKnown RBP9.11□□□□□ -0.95
USP3-208ENST00000558285 FBXO21O94952 628 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
USP3-208ENST00000558285 PTMAP06454 111 aaKnown RBP9.11□□□□□ -0.95
USP3-208ENST00000558285 ACADSBP45954 432 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 CDR1P51861 262 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 RAD23BP54727 409 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 TPM4P67936 248 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 ZNF77Q15935 545 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 GOLGA7BQ2TAP0 167 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 C12orf29Q8N999 325 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 MSANTD4Q8NCY6 345 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 P2RY13Q9BPV8 354 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 FAM83CQ9BQN1 747 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 FOXQ1Q9C009 403 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 MIS12Q9H081 205 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 INTS2Q9H0H0 1204 aaKnown RBP9.11□□□□□ -0.95
USP3-208ENST00000558285 ECT2Q9H8V3 914 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 LMAN1LQ9HAT1 526 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 LMBRD1Q9NUN5 540 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 RAB23Q9ULC3 237 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 CPQQ9Y646 472 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 EYSQ5T1H1 3165 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 A0A0C4DFX4 3053 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 OLFM2O95897 454 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 CYBBP04839 570 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 DCNP07585 359 aaKnown RBP9.11□□□□□ -0.95
USP3-208ENST00000558285 BMP6P22004 513 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 EIF2DP41214 584 aaKnown RBP9.11□□□□□ -0.95
USP3-208ENST00000558285 CXCL12P48061 93 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 KIF11P52732 1056 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 USP46P62068 366 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 NHLH1Q02575 133 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 GAD2Q05329 585 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 PTK2Q05397 1052 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 MTA1Q13330 715 aa9.11□□□□□ -0.95
USP3-208ENST00000558285 ORC1Q13415 861 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms