RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CSH1P0DML2 217 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 CSH2P0DML3 217 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 SDC4P31431 198 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 IRS1P35568 1242 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 ZNF143P52747 638 aaPredicted RBP17.67■□□□□ 0.42
SNX1-203ENST00000558040 EPHB3P54753 998 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 TAF5Q15542 800 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 TAF12Q16514 161 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 PTPROQ16827 1216 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 LILRA6Q6PI73 481 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 ELMSAN1Q6PJG2 1045 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 EMC1Q8N766 993 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 GIPC2Q8TF65 315 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 RXFP2Q8WXD0 754 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 ZNF592Q92610 1267 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 FBXO32Q969P5 355 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 NCAPGQ9BPX3 1015 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 CNPY3Q9BT09 278 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNX1-203ENST00000558040 DPP7Q9UHL4 492 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 STAP1Q9ULZ2 295 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 ALG6Q9Y672 507 aa17.67■□□□□ 0.42
SNX1-203ENST00000558040 FAM92AA1XBS5 289 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 YJEFN3A6XGL0 299 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 E7ENQ6 273 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 RNF8O76064 485 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 COMTP21964 271 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 NOS2P35228 1153 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 FLT3P36888 993 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 MATKP42679 507 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 CLCN4P51793 760 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 OGDHQ02218 1023 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 TWF1Q12792 350 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 BEND5Q7L4P6 421 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 ITIH5Q86UX2 942 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 NT5DC3Q86UY8 548 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 MON1AQ86VX9 555 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 KREMEN2Q8NCW0 462 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 SLC7A14Q8TBB6 771 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 GPR152Q8TDT2 470 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 GDPD5Q8WTR4 605 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 NDRG1Q92597 394 aaKnown RBP17.66■□□□□ 0.42
SNX1-203ENST00000558040 KHSRPQ92945 711 aaKnown RBP eCLIP17.66■□□□□ 0.422e-6■□□□□ 10.8
SNX1-203ENST00000558040 SLITRK1Q96PX8 696 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 SLC2A13Q96QE2 648 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 TTLL2Q9BWV7 592 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 GOLPH3Q9H4A6 298 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 RRN3Q9NYV6 651 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 ASB3Q9Y575 518 aa17.66■□□□□ 0.42
SNX1-203ENST00000558040 MIF4GDA9UHW6 222 aaKnown RBP17.65■□□□□ 0.42
SNX1-203ENST00000558040 LRG1P02750 347 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 C8AP07357 584 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 PTPN9P43378 593 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 PSEN1P49768 467 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNX1-203ENST00000558040 ZNF252P-AS1Q0IIN9 211 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 RPS6KA1Q15418 735 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 BHLHA9Q7RTU4 235 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 DEFB106AQ8N104 65 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 ELMOD1Q8N336 334 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 PDZD8Q8NEN9 1154 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 HDAC7Q8WUI4 952 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 PPP2R3CQ969Q6 453 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 DDX23Q9BUQ8 820 aaKnown RBP17.65■□□□□ 0.42
SNX1-203ENST00000558040 PLEKHA4Q9H4M7 779 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 TLR8Q9NR97 1041 aaKnown RBP17.65■□□□□ 0.42
SNX1-203ENST00000558040 ABCC13Q9NSE7 274 aa17.65■□□□□ 0.42
SNX1-203ENST00000558040 UXTQ9UBK9 157 aaPredicted RBP17.65■□□□□ 0.42
SNX1-203ENST00000558040 CEP290O15078 2479 aa17.64■□□□□ 0.42
SNX1-203ENST00000558040 CLASP2O75122 1294 aaKnown RBP17.64■□□□□ 0.41
SNX1-203ENST00000558040 SPATA31D3P0C874 917 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 NCAM1P13591 858 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 SSR1P43307 286 aaKnown RBP17.64■□□□□ 0.41
SNX1-203ENST00000558040 USP46P62068 366 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 LRIT3Q3SXY7 679 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 CCDC14Q49A88 953 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 DCAF6Q58WW2 860 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 PPM1LQ5SGD2 360 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 BSPRYQ5W0U4 402 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 TRNP1Q6NT89 227 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 SPATA31D4Q6ZUB0 917 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 HFE2Q6ZVN8 426 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 UBL4BQ8N7F7 174 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 STKLD1Q8NE28 680 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 OVCA2Q8WZ82 227 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 TRMT2BQ96GJ1 504 aaKnown RBP17.64■□□□□ 0.41
SNX1-203ENST00000558040 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 MAGED2Q9UNF1 606 aaPredicted RBP17.64■□□□□ 0.41
SNX1-203ENST00000558040 USTQ9Y2C2 406 aa17.64■□□□□ 0.41
SNX1-203ENST00000558040 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNX1-203ENST00000558040 PLXNA3P51805 1871 aa17.63■□□□□ 0.41
SNX1-203ENST00000558040 MYO16Q9Y6X6 1858 aa17.63■□□□□ 0.41
SNX1-203ENST00000558040 CCDC66A2RUB6 948 aa17.63■□□□□ 0.41
SNX1-203ENST00000558040 ENC1O14682 589 aa17.63■□□□□ 0.41
SNX1-203ENST00000558040 ATP1A1P05023 1023 aaKnown RBP17.63■□□□□ 0.41
SNX1-203ENST00000558040 SULT1E1P49888 294 aa17.63■□□□□ 0.41
SNX1-203ENST00000558040 TAF10Q12962 218 aa17.63■□□□□ 0.41
SNX1-203ENST00000558040 MTMR3Q13615 1198 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms