RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TXNDC8Q6A555 127 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 MON1BQ7L1V2 547 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-213ENST00000557644 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
NEDD1-213ENST00000557644 PDLIM2Q96JY6 352 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 ADAM22Q9P0K1 906 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 NAGPAQ9UK23 515 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 A0A0C4DFX4 3053 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 C2orf78A6NCI8 922 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 AKR1B10O60218 316 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-213ENST00000557644 ZDHHC11BP0C7U3 371 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 CDC25CP30307 473 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 GABRB2P47870 512 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 GSDMDP57764 484 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 MTF1Q14872 753 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 SLC18A3Q16572 532 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 ALKBH5Q6P6C2 394 aaKnown RBP16.05■□□□□ 0.16
NEDD1-213ENST00000557644 XYLT1Q86Y38 959 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 LEMD2Q8NC56 503 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 BAG1Q99933 345 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-213ENST00000557644 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-213ENST00000557644 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 NUDT5Q9UKK9 219 aa16.05■□□□□ 0.16
NEDD1-213ENST00000557644 GRAP2O75791 330 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 GZMAP12544 262 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 PTCRAQ6ISU1 281 aaPredicted RBP16.04■□□□□ 0.16
NEDD1-213ENST00000557644 OLFML1Q6UWY5 402 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 MON1AQ86VX9 555 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 ZSWIM3Q96MP5 696 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 GCNAQ96QF7 691 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 NENFQ9UMX5 172 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 ZNF197O14709 1029 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 ZNF263O14978 683 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 ATMINO43313 823 aaPredicted RBP16.04■□□□□ 0.16
NEDD1-213ENST00000557644 FBXO21O94952 628 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 KCNQ1P51787 676 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 YWHAGP61981 247 aaKnown RBP eCLIP16.04■□□□□ 0.16
NEDD1-213ENST00000557644 CCDC122Q5T0U0 273 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 ST13P5Q8NFI4 369 aaPredicted RBP16.04■□□□□ 0.16
NEDD1-213ENST00000557644 EDEM1Q92611 657 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 FGF13Q92913 245 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 NECTIN4Q96NY8 510 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 CYP2S1Q96SQ9 504 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 CCSER2Q9H7U1 834 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 TRPC7Q9HCX4 862 aa16.04■□□□□ 0.16
NEDD1-213ENST00000557644 TLR8Q9NR97 1041 aaKnown RBP16.04■□□□□ 0.16
NEDD1-213ENST00000557644 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 RTN2O75298 545 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 GJB6O95452 261 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 TBX18O95935 607 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 IL9P15248 144 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 GPR158Q5T848 1215 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 BSPRYQ5W0U4 402 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 RAD9BQ6WBX8 426 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 NPAS3Q8IXF0 933 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 SCML4Q8N228 414 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 PDZD8Q8NEN9 1154 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 OVCA2Q8WZ82 227 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 MRPS31Q92665 395 aaKnown RBP16.03■□□□□ 0.16
NEDD1-213ENST00000557644 KHSRPQ92945 711 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■■■□ 20
NEDD1-213ENST00000557644 FAM149B1Q96BN6 582 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 MCRS1Q96EZ8 462 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 SLC46A2Q9BY10 475 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 ISCUQ9H1K1 167 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 SLITRK6Q9H5Y7 841 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 THEGQ9P2T0 379 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 MYO16Q9Y6X6 1858 aa16.03■□□□□ 0.16
NEDD1-213ENST00000557644 FGF19O95750 216 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 ABCB4P21439 1286 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 RRM1P23921 792 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
NEDD1-213ENST00000557644 SMAD2Q15796 467 aaKnown RBP16.02■□□□□ 0.16
NEDD1-213ENST00000557644 TMTC1Q8IUR5 882 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 MYADMQ96S97 322 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 PACSIN1Q9BY11 444 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 RNF38Q9H0F5 515 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 NCANO14594 1321 aa16.02■□□□□ 0.16
NEDD1-213ENST00000557644 FYNP06241 537 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 PPP3CCP48454 512 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 SNX16P57768 344 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.15
NEDD1-213ENST00000557644 SLC6A3Q01959 620 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.15
NEDD1-213ENST00000557644 SNX30Q5VWJ9 437 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 LRRC8AQ8IWT6 810 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 IRGQQ8WZA9 623 aa16.02■□□□□ 0.15
NEDD1-213ENST00000557644 SMG9Q9H0W8 520 aaKnown RBP16.02■□□□□ 0.15
NEDD1-213ENST00000557644 TLR5O60602 858 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 OAS1P00973 400 aaKnown RBP16.01■□□□□ 0.15
NEDD1-213ENST00000557644 LTFP02788 710 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 CALB1P05937 261 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 RARGP13631 454 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
NEDD1-213ENST00000557644 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms