RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GLRA2P23416 452 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CYP3A7P24462 503 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CSRP3P50461 194 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 RPL6Q02878 288 aaKnown RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 ZNF33AQ06730 810 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 DUSP4Q13115 394 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 PPP2R5CQ13362 524 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 PRPF4BQ13523 1007 aaKnown RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 FAM187BQ17R55 369 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 DCAF4L1Q3SXM0 396 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 ANO6Q4KMQ2 910 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 RNFT1Q5M7Z0 435 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 PCSK4Q6UW60 755 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 SLC36A4Q6YBV0 504 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 ATCAYQ86WG3 371 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 MARCH9Q86YJ5 346 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 LRRC8AQ8IWT6 810 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CCDC33Q8N5R6 958 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 FRMD1Q8N878 549 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CCDC148Q8NFR7 591 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 TBCKQ8TEA7 893 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 SETD7Q8WTS6 366 aaKnown RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 WBP1Q96G27 269 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CEP63Q96MT8 703 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CCDC43Q96MW1 224 aaKnown RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 TIGD1Q96MW7 591 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 PGLYRP2Q96PD5 576 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 PNMA5Q96PV4 448 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 CDC6Q99741 560 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 SLC46A2Q9BY10 475 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 TRIM5Q9C035 493 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 ZDHHC5Q9C0B5 715 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 ZSWIM4Q9H7M6 989 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 ECT2Q9H8V3 914 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 L2HGDHQ9H9P8 463 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 PCDHGC4Q9Y5F7 938 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 RBM8AQ9Y5S9 174 aaKnown RBP7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 FLNCQ14315 2725 aa7.34□□□□□ -1.23
SPTLC2-206ENST00000557566 COL5A1P20908 1838 aaPredicted RBP7.34□□□□□ -1.24
SPTLC2-206ENST00000557566 MYO18AQ92614 2054 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SMIM28A0A1B0GU29 152 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 FAM149AA5PLN7 773 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 GOLGA6L4A6NEF3 574 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SLC28A2O43868 658 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SLU7O95391 586 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 VNN2O95498 520 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 THBS1P07996 1170 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 TPM1P09493 284 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 GNSP15586 552 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 DDX6P26196 483 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 MARCKSP29966 332 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 RPL9P32969 192 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 ZNF165P49910 485 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 IDH3AP50213 366 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 YARSP54577 528 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 MRPS21P82921 87 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SOX4Q06945 474 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 GPR17Q13304 367 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 KRT32Q14532 448 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 VEPH1Q14D04 833 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 IQCB1Q15051 598 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 TAF12Q16514 161 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 STX1AQ16623 288 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 PLEKHG6Q3KR16 790 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 CDCA2Q69YH5 1023 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 MOXD1Q6UVY6 613 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 APBB1IPQ7Z5R6 666 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 DRC7Q8IY82 874 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 DEFB119Q8N690 84 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SPC24Q8NBT2 197 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 CACTINQ8WUQ7 758 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 LEO1Q8WVC0 666 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 HMGB4Q8WW32 186 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 USP13Q92995 863 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 ATP2A3Q93084 1043 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 DMRTB1Q96MA1 342 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 BPIFA3Q9BQP9 254 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SRRTQ9BXP5 876 aaKnown RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 POLR3FQ9H1D9 316 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 C2orf40Q9H1Z8 148 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 FZD8Q9H461 694 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 FAM124BQ9H5Z6 455 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 TDP1Q9NUW8 608 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 SUSD2Q9UGT4 822 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 VAV3Q9UKW4 847 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 CFAP45Q9UL16 551 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 ATXN7L1Q9ULK2 861 aaPredicted RBP7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 CCL26Q9Y258 94 aa7.33□□□□□ -1.24
SPTLC2-206ENST00000557566 BOD1L1Q8NFC6 3051 aa7.32□□□□□ -1.24
SPTLC2-206ENST00000557566 NOTCH2Q04721 2471 aa7.32□□□□□ -1.24
SPTLC2-206ENST00000557566 NBPF19A0A087WUL8 3843 aa7.32□□□□□ -1.24
SPTLC2-206ENST00000557566 VPS37CA5D8V6 355 aaPredicted RBP7.32□□□□□ -1.24
SPTLC2-206ENST00000557566 GOLGA6L19H0YKK7 550 aa7.32□□□□□ -1.24
SPTLC2-206ENST00000557566 K7EQS6 105 aa7.32□□□□□ -1.24
SPTLC2-206ENST00000557566 TULP2O00295 520 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms