RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 GABRB2P47870 512 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 YWHAZP63104 245 aaKnown RBP18.45■□□□□ 0.54
XRCC3-218ENST00000557439 ZNF200P98182 395 aaPredicted RBP18.45■□□□□ 0.54
XRCC3-218ENST00000557439 GOLGA7BQ2TAP0 167 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 PPP1R26Q5T8A7 1209 aaPredicted RBP18.45■□□□□ 0.54
XRCC3-218ENST00000557439 CLNKQ7Z7G1 428 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 ACOT1Q86TX2 421 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 PQLC3Q8N755 202 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 PLD5Q8N7P1 536 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 PLAC1Q9HBJ0 212 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 SMYD2Q9NRG4 433 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 ARL8BQ9NVJ2 186 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 NME7Q9Y5B8 376 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 IKBKGQ9Y6K9 419 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 RASA2Q15283 850 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 CTC1Q2NKJ3 1217 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 FYB2Q5VWT5 728 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 CLEC4CQ8WTT0 213 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 RNF157Q96PX1 679 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 CNPY3Q9BT09 278 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 TSSK1BQ9BXA7 367 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 SMARCAD1Q9H4L7 1026 aa18.45■□□□□ 0.54
XRCC3-218ENST00000557439 CCDC195A0A1B0GUA6 201 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 TRIM49D1C9J1S8 452 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 C2CD2LO14523 706 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 GAS2O43903 313 aaKnown RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 PEX11AO75192 247 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 GABBR2O75899 941 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 VDRP11473 427 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 ATP2A2P16615 1042 aaKnown RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 SERPINB3P29508 390 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 GRIA1P42261 906 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 TMEM132DQ14C87 1099 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 PCDH19Q8TAB3 1148 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 FAM172AQ8WUF8 416 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 MMP19Q99542 508 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 MRPL45Q9BRJ2 306 aaKnown RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 CYB561D2O14569 222 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 HBP1O60381 514 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 ENDOD1O94919 500 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 ETV4P43268 484 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 TMEM62Q0P6H9 643 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 KCTD2Q14681 263 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 ANKRD20A2Q5SQ80 823 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 ANKRD20A1Q5TYW2 823 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 ANKRD20A3Q5VUR7 823 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 TTC30AQ86WT1 665 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 MPP5Q8N3R9 675 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 RAB3IPQ96QF0 476 aaPredicted RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 SLC13A1Q9BZW2 595 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 KCNK13Q9HB14 408 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 PIH1D1Q9NWS0 290 aaKnown RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 TTLL3Q9Y4R7 772 aa18.44■□□□□ 0.54
XRCC3-218ENST00000557439 MYO18AQ92614 2054 aaKnown RBP18.44■□□□□ 0.54
XRCC3-218ENST00000557439 CES4AQ5XG92 561 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 SH2D5Q6ZV89 423 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 SNRNP25Q9BV90 132 aaKnown RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 DENND2DQ9H6A0 471 aaPredicted RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 PRMT7Q9NVM4 692 aaPredicted RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 DPP3Q9NY33 737 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 ARMCX1Q9P291 453 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 BARX2Q9UMQ3 279 aaPredicted RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 MFHAS1Q9Y4C4 1052 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 FAM237BA0A1B0GVD1 139 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 SKAP2O75563 359 aaPredicted RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 C1QAP02745 245 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 TROVE2P10155 538 aaKnown RBP eCLIP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 NEK3P51956 506 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 TRMT10BQ6PF06 316 aaKnown RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 CAND1Q86VP6 1230 aaKnown RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 RSRC1Q96IZ7 334 aaKnown RBP18.43■□□□□ 0.54
XRCC3-218ENST00000557439 TMEM120AQ9BXJ8 343 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 PCDH18Q9HCL0 1135 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 SLC17A6Q9P2U8 582 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 HES2Q9Y543 173 aa18.43■□□□□ 0.54
XRCC3-218ENST00000557439 A0A1B0GUA9 196 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 TM9SF1O15321 606 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 PCK1P35558 622 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 PHKA2P46019 1235 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 BCAR1P56945 870 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 SLC45A4Q5BKX6 768 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 UNC5BQ8IZJ1 945 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 NLRP7Q8WX94 980 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 KIF12Q96FN5 646 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 APOPT1Q96IL0 206 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 FAM167BQ9BTA0 163 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 PPCSQ9HAB8 311 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 SSU72Q9NP77 194 aaKnown RBP18.42■□□□□ 0.54
XRCC3-218ENST00000557439 OTOFQ9HC10 1997 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 IQANK1A0A1B0GTG1 560 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 ZBED1O96006 694 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 CPA2P48052 419 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 ERFP50548 548 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 GBE1Q04446 702 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 MDH1BQ5I0G3 518 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 KHSRPQ92945 711 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms