RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ASPMQ8IZT6 3477 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 TBC1D3BA6NDS4 549 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 SLC9A3R1O14745 358 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-210ENST00000557431 EIF3DO15371 548 aaKnown RBP eCLIP14.95□□□□□ -0.02
SLIRP-210ENST00000557431 TULP3O75386 442 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 BEST1O76090 585 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 CFIP05156 583 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 GABRG2P18507 467 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 GRIA2P42262 883 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 NASPP49321 788 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-210ENST00000557431 SLC5A3P53794 718 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 C10orf76Q5T2E6 689 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 LYSMD4Q5XG99 296 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 EGFLAMQ63HQ2 1017 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 SHC4Q6S5L8 630 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 ACOT1Q86TX2 421 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 C11orf74Q86VG3 221 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 TMEM25Q86YD3 366 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 ETFBKMTQ8IXQ9 262 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 ZNF513Q8N8E2 541 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-210ENST00000557431 XXYLT1Q8NBI6 393 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 LINC00301Q8NCQ3 95 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 GTPBP2Q9BX10 602 aaKnown RBP14.95□□□□□ -0.02
SLIRP-210ENST00000557431 NUSAP1Q9BXS6 441 aaKnown RBP14.95□□□□□ -0.02
SLIRP-210ENST00000557431 SLC39A2Q9NP94 309 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 KRT82Q9NSB4 513 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 HMGXB4Q9UGU5 601 aa14.95□□□□□ -0.02
SLIRP-210ENST00000557431 MDM4O15151 490 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 SPTLC2O15270 562 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 PHACTR2O75167 634 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 TBX18O95935 607 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 CEACAM1P13688 526 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 CSRP1P21291 193 aaKnown RBP14.94□□□□□ -0.02
SLIRP-210ENST00000557431 EIF2DP41214 584 aaKnown RBP14.94□□□□□ -0.02
SLIRP-210ENST00000557431 PPP3CCP48454 512 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 FAM193AP78312 1265 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 GAD2Q05329 585 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 BIRC3Q13489 604 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 HECTD3Q5T447 861 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 SYT12Q8IV01 421 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 ZMIZ2Q8NF64 920 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 CCDC26Q8TAB7 109 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 GATA6Q92908 595 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 CEP295NLQ96MC4 621 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 KIAA1586Q9HCI6 787 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 FAM49BQ9NUQ9 324 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 EHD2Q9NZN4 543 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 CALCOCO1Q9P1Z2 691 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 EVLQ9UI08 416 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-210ENST00000557431 NUDT5Q9UKK9 219 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 KLK13Q9UKR3 277 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 RAD54BQ9Y620 910 aa14.94□□□□□ -0.02
SLIRP-210ENST00000557431 WDFY3Q8IZQ1 3526 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 E2F8A0AVK6 867 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 LRRIQ3A6PVS8 624 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-210ENST00000557431 TNFRSF10BO14763 440 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 STX6O43752 255 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 AP1G2O75843 785 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 RTN3O95197 1032 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-210ENST00000557431 VNN1O95497 513 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 HOXB2P14652 356 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 TNFRSF4P43489 277 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 AFMP43652 599 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 RPL6Q02878 288 aaKnown RBP14.93□□□□□ -0.02
SLIRP-210ENST00000557431 ZNF699Q32M78 642 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 SPOPLQ6IQ16 392 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 TPGS1Q6ZTW0 290 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 TOGARAM2Q6ZUX3 1019 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 GPRIN1Q7Z2K8 1008 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 DDX42Q86XP3 938 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLIRP-210ENST00000557431 SLC41A1Q8IVJ1 513 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 FUKQ8N0W3 1084 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 TERB1Q8NA31 727 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 BHMTQ93088 406 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 SMOQ99835 787 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 SPHK2Q9NRA0 654 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 TBC1D14Q9P2M4 693 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 PILRBQ9UKJ0 227 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 CYP8B1Q9UNU6 501 aa14.93□□□□□ -0.02
SLIRP-210ENST00000557431 A0A0A0MRY4 1105 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-210ENST00000557431 NEDD8-MDP1E9PL57 170 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 ADORA2BP29275 332 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 MAP3K7CLP57077 242 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 DLG4P78352 724 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 SIM1P81133 766 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-210ENST00000557431 EHHADHQ08426 723 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 CUL4BQ13620 913 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 ZNF667Q5HYK9 610 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 BTBD8Q5XKL5 378 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 SLC23A3Q6PIS1 610 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 UNC13DQ70J99 1090 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 C12orf29Q8N999 325 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 PDZD8Q8NEN9 1154 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 ZCCHC14Q8WYQ9 949 aaKnown RBP14.92□□□□□ -0.02
SLIRP-210ENST00000557431 P2RY11Q96G91 374 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 C7orf25Q9BPX7 421 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 NACA2Q9H009 215 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms