RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZC3H10Q96K80 434 aaKnown RBP14.99□□□□□ -0.01
SNX6-210ENST00000557341 DNAI2Q9GZS0 605 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 CYP3A43Q9HB55 503 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 GDPD2Q9HCC8 539 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 TMEM8AQ9HCN3 771 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.012e-9■■■■■ 223.6
SNX6-210ENST00000557341 TLR8Q9NR97 1041 aaKnown RBP14.99□□□□□ -0.01
SNX6-210ENST00000557341 EBF1Q9UH73 591 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
SNX6-210ENST00000557341 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 ABCA7Q8IZY2 2146 aa14.99□□□□□ -0.01
SNX6-210ENST00000557341 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.98□□□□□ -0.01
SNX6-210ENST00000557341 TLR5O60602 858 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 APODP05090 189 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 ADAM9Q13443 819 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 ELF2Q15723 593 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 EDRF1Q3B7T1 1238 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 C12orf40Q86WS4 652 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 TWNKQ96RR1 684 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 PNKPQ96T60 521 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 HNRNPABQ99729 332 aaKnown RBP14.98□□□□□ -0.01
SNX6-210ENST00000557341 DUSP9Q99956 384 aaKnown RBP14.98□□□□□ -0.01
SNX6-210ENST00000557341 NT5C1AQ9BXI3 368 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 ARRDC1-AS1Q9H2J1 176 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 APOBEC3GQ9HC16 384 aaKnown RBP14.98□□□□□ -0.01
SNX6-210ENST00000557341 PNPLA8Q9NP80 782 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 MMP17Q9ULZ9 603 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 PCDHGA5Q9Y5G8 931 aa14.98□□□□□ -0.01
SNX6-210ENST00000557341 SLC30A4O14863 429 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 CILPO75339 1184 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 KAT7O95251 611 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 IRF1P10914 325 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 CD58P19256 250 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 GTF2H1P32780 548 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 DGKEP52429 567 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 MRPS21P82921 87 aaKnown RBP14.97□□□□□ -0.01
SNX6-210ENST00000557341 GAD2Q05329 585 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 KDSRQ06136 332 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 AASDHQ4L235 1098 aaPredicted RBP14.97□□□□□ -0.01
SNX6-210ENST00000557341 LY6G5CQ5SRR4 150 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 KRT39Q6A163 491 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 RHBDF2Q6PJF5 856 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 CLEC20AQ6ZU45 233 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 C12orf50Q8NA57 414 aaPredicted RBP14.97□□□□□ -0.01
SNX6-210ENST00000557341 JAKMIP2Q96AA8 810 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 CYFIP2Q96F07 1278 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 ARHGEF4Q9NR80 690 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 RMND1Q9NWS8 449 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 PCDHA5Q9Y5H7 936 aa14.97□□□□□ -0.01
SNX6-210ENST00000557341 DCDC2BA2VCK2 349 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 CYP26A1O43174 497 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 HOXC11O43248 304 aaPredicted RBP14.96□□□□□ -0.01
SNX6-210ENST00000557341 GDF9O60383 454 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 EPB41P11171 864 aaKnown RBP14.96□□□□□ -0.01
SNX6-210ENST00000557341 MPLP40238 635 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 SLC6A11P48066 632 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 MXI1P50539 228 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 GOLGA8FQ08AF8 430 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 GOLGA8DPQ0D2H9 430 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 PNOCQ13519 176 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 CRY1Q16526 586 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 PLK5Q496M5 336 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 HSF5Q4G112 596 aaPredicted RBP14.96□□□□□ -0.01
SNX6-210ENST00000557341 PREPLQ4J6C6 727 aaPredicted RBP14.96□□□□□ -0.01
SNX6-210ENST00000557341 BTBD8Q5XKL5 378 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 ANO7Q6IWH7 933 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 GPRIN1Q7Z2K8 1008 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 C11orf74Q86VG3 221 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 RASSF3Q86WH2 238 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 BBS7Q8IWZ6 715 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 SMYD4Q8IYR2 804 aaPredicted RBP14.96□□□□□ -0.01
SNX6-210ENST00000557341 CCDC33Q8N5R6 958 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 FAXDC2Q96IV6 333 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.01
SNX6-210ENST00000557341 TPSD1Q9BZJ3 242 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 CYLDQ9NQC7 956 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 SCML2Q9UQR0 700 aa14.96□□□□□ -0.01
SNX6-210ENST00000557341 PI4KAP42356 2102 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 HHLA1C9JL84 531 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 CETN3O15182 167 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 STX10O60499 249 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 ALDH1A2O94788 518 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 RHOBTB1O94844 696 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 ZNF806P0C7X5 589 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 ACO1P21399 889 aaKnown RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 GBP1P32455 592 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 GRIA2P42262 883 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 MESP2Q0VG99 397 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 SF3A2Q15428 464 aaKnown RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 CCDC6Q16204 474 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 USP39Q53GS9 565 aaKnown RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 SFTPA1Q8IWL2 248 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 ETFBKMTQ8IXQ9 262 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 FMR1NBQ8N0W7 255 aaPredicted RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 TTC39CQ8N584 583 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 ALLCQ8N6M5 410 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 IL17RCQ8NAC3 791 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 TXNDC5Q8NBS9 432 aaKnown RBP14.95□□□□□ -0.02
SNX6-210ENST00000557341 FBXL13Q8NEE6 735 aa14.95□□□□□ -0.02
SNX6-210ENST00000557341 MDGA1Q8NFP4 955 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms