RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TANGO2Q6ICL3 276 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PRSS55Q6UWB4 352 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 LRSAM1Q6UWE0 723 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CEP68Q76N32 757 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 MIER3Q7Z3K6 550 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SPEM1Q8N4L4 309 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PDZD8Q8NEN9 1154 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 OR6P1Q8NGX9 317 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 EXOC6Q8TAG9 804 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 LNX1Q8TBB1 728 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PRPF31Q8WWY3 499 aaKnown RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 FAM3CQ92520 227 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SLC5A5Q92911 643 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PPP1R14AQ96A00 147 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 LENG9Q96B70 501 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CCDC51Q96ER9 411 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 MCRS1Q96EZ8 462 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CLSTN3Q9BQT9 956 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 TTPALQ9BTX7 342 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 TRMT61BQ9BVS5 477 aaKnown RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 LSM14BQ9BX40 385 aaKnown RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PLA2G2FQ9BZM2 168 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 ZMYND12Q9H0C1 365 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 BRD9Q9H8M2 597 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 TRPV5Q9NQA5 729 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 C19orf73Q9NVV2 129 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 NDRG2Q9UN36 371 aaKnown RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 PCDHB10Q9UN67 800 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SMC3Q9UQE7 1217 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 IPPQ9Y573 584 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 RBM8AQ9Y5S9 174 aaKnown RBP5.35□□□□□ -1.55
ATXN3-247ENST00000557311 ATRXP46100 2492 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
ATXN3-247ENST00000557311 SF3B1O75533 1304 aaKnown RBP eCLIP5.34□□□□□ -1.554e-12■■■■■ 275.7
ATXN3-247ENST00000557311 TMEM150BA6NC51 233 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 H0YHG0 523 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 TULP2O00295 520 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 SGSM2O43147 1006 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 DKC1O60832 514 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 COQ9O75208 318 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PSMD10O75832 226 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PAPSS2O95340 614 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 GSTM1P09488 218 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 C1QTNF9P0C862 333 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 CHRNB1P11230 501 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PTPN2P17706 415 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 HOXA6P31267 233 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 MLH1P40692 756 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PSMC5P62195 406 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 SARNPP82979 210 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 CHRNEQ04844 493 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 GABPB1Q06547 395 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 SPIRE1Q08AE8 756 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 LAMTOR4Q0VGL1 99 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 LRRC32Q14392 662 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PSMD5Q16401 504 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PFKFB3Q16875 520 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 RTP2Q5QGT7 225 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 HEATR6Q6AI08 1181 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 CRTC3Q6UUV7 619 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ZPBP2Q6X784 338 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 CEP128Q6ZU80 1094 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ANO5Q75V66 913 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 CEP57Q86XR8 500 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 TAB3Q8N5C8 712 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ANKS4BQ8N8V4 417 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 RBBP8NLQ8NC74 664 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 GSTCDQ8NEC7 633 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ADCY4Q8NFM4 1077 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 SLC7A14Q8TBB6 771 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 BICD2Q8TD16 824 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 TCP11Q8WWU5 503 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ZBTB9Q96C00 473 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 SEC16BQ96JE7 1060 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 EIF2AQ9BY44 585 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 CSRNP2Q9H175 543 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 NOL6Q9H6R4 1146 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 MINDY3Q9H8M7 445 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF334Q9HCZ1 680 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 HCFC1R1Q9NWW0 138 aa5.34□□□□□ -1.55
ATXN3-247ENST00000557311 R3HCC1Q9Y3T6 440 aaKnown RBP5.34□□□□□ -1.55
ATXN3-247ENST00000557311 BAZ2BQ9UIF8 2168 aaKnown RBP5.33□□□□□ -1.56
ATXN3-247ENST00000557311 UQCRHLA0A096LP55 91 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms